ttung / nbencdecLinks
Tool to encode/decode .ipynb into .py files.
☆17Updated 4 years ago
Alternatives and similar repositories for nbencdec
Users that are interested in nbencdec are comparing it to the libraries listed below
Sorting:
- Tool to easily start up an IPython cluster on different schedulers.☆146Updated 5 years ago
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 7 years ago
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated 2 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated 2 years ago
- Deploy Dask on DRMAA clusters☆40Updated 4 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 8 years ago
- CGAT-ruffus is a lightweight python module for running computational pipelines☆175Updated 4 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆125Updated 2 years ago
- Efficient storage of same-type, uneven-size arrays☆12Updated 7 years ago
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Updated 6 years ago
- The Clustergrammer interactive Jupyter notebook widget☆47Updated 3 years ago
- permutation tests and confidence sets☆58Updated 4 months ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆30Updated 5 years ago
- Tools to manage jobs on supercomputer☆41Updated 10 years ago
- friendly command-line tool for initializing python packages☆18Updated 5 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 5 months ago
- A simple IPython/Jupyter cell magic command to display name and version of imported modules.☆16Updated 8 years ago
- Caleydo - Visualization for Molecular Biology☆60Updated 9 years ago
- %conda magic for IPython☆28Updated 8 years ago
- Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.☆19Updated this week
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆83Updated 5 years ago
- This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science☆16Updated 7 years ago
- ggplot2 syntax in python. Actually wrapper around Wickham's ggplot2 in R☆71Updated 4 years ago
- scripts for using spark on janelia's cluster☆13Updated 2 years ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆21Updated 9 years ago
- Beeswarm plots for python☆34Updated 10 years ago
- SolveBio Python bindings☆20Updated 3 weeks ago
- A demo and tutorial for how to use git and singularity to make your research more portable and reproducible☆26Updated 9 years ago
- DEPRECATED. Please visit our new repository (cytoscape/cyREST)☆27Updated 8 years ago