Alternatives and similar repositories for MultiStar

Users that are interested in MultiStar are comparing it to the libraries listed below

• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆57Updated 2 years ago
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 3 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• BiomedicalMachineLearning / HEMnet
  A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues
  ☆32Updated 5 months ago
• Path-AI / hif2gene
  Data and code to accompany our Nature publication
  ☆46Updated 3 years ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆32Updated 4 years ago
• huangzhii / IMPRESS
  ☆20Updated 2 years ago
• ajinkya-kulkarni / PySpatialHistologyAnalysis
  Package using StarDist and Python that performs object detection and spatial analysis on H&E images
  ☆4Updated 8 months ago
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆35Updated 5 months ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆53Updated last year
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆72Updated last year
• masih4 / NuInsSeg
  NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images
  ☆33Updated last year
• kevindehaan / stain-transformation
  ☆40Updated 3 years ago
• AstroPathJHU / AstroPathPipeline
  The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …
  ☆19Updated 2 months ago
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆53Updated 4 months ago
• AllenCell / aics-segmentation
  Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow
  ☆26Updated 11 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆34Updated last year
• jlevy44 / WSI-GTFE
  Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.
  ☆23Updated 4 years ago
• stanfordmlgroup / DLBCL-Morph
  DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …
  ☆36Updated 4 years ago
• m4ln / stainTransfer_CycleGAN_pytorch
  Image-to-Image Translation in PyTorch
  ☆23Updated last year
• javadnoorb / HistCNN
  A set of codes to classify H&E slides using deep learning
  ☆30Updated 3 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆79Updated last week
• KatherLab / deepmed
  ☆48Updated 3 years ago
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆30Updated last year
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆68Updated 2 years ago
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• yanglf1121 / NuSeT
  NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells
  ☆20Updated 4 years ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆68Updated 5 months ago
• vanvalenlab / cellSAM
  Codebase for "A Foundation Model for Cell Segmentation"
  ☆98Updated this week