overlapping-instances / MultiStarLinks
☆10Updated 5 years ago
Alternatives and similar repositories for MultiStar
Users that are interested in MultiStar are comparing it to the libraries listed below
Sorting:
- Python 3 library for the augmentation & normalization of H&E images☆61Updated 3 years ago
- Pipeline for computational pathology☆38Updated last year
- Re-stained whole slide image alignment☆35Updated 2 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 10 months ago
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- A Python library for deep learning on whole-slide images☆53Updated 4 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆70Updated 3 years ago
- NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells☆20Updated 5 years ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆36Updated last year
- Data and code to accompany our Nature publication☆48Updated 3 years ago
- ☆20Updated 2 years ago
- ☆57Updated 3 years ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆40Updated 3 months ago
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆38Updated 4 years ago
- An open-source digital pathology based rapid image annotation tool☆87Updated last week
- ☆10Updated 2 years ago
- A tool for rapidly labeling objects using deep learning feature embedding☆34Updated 3 months ago
- The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …☆19Updated 7 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆77Updated 9 months ago
- Codebase for "A Foundation Model for Cell Segmentation"☆114Updated 2 weeks ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆36Updated 9 months ago
- ☆49Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated 3 weeks ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated last year
- Interactive Segmentation of Nucleus☆66Updated 3 years ago
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- ☆34Updated 2 years ago