A Bioconductor R package for detecting cell-to-cell variably methylated regions (VMRs) from single-cell bisulfite sequencing leveraging probabilistic models.
☆10Jul 13, 2025Updated 9 months ago
Alternatives and similar repositories for vmrseq
Users that are interested in vmrseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆25Jan 26, 2024Updated 2 years ago
- Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSC…☆12Mar 22, 2024Updated 2 years ago
- A deep reinforcement learning framework for generating formulaic alpha factors for quantitative investment, powered by GFlowNet, implemen…☆106Jan 23, 2026Updated 3 months ago
- ☆14Oct 9, 2025Updated 6 months ago
- Interactive visulizations for track-based genomic data in R☆15Sep 9, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 2 years ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Mar 13, 2026Updated last month
- Peak calling and differential methylation for MeRIP-Seq☆36Oct 1, 2024Updated last year
- Multithreaded read analysis☆25Mar 18, 2026Updated last month
- code for ICLR 2024 paper MG-TSD: Multi-Granularity Time Series Diffusion Models with Guided Learning Process☆41Mar 9, 2024Updated 2 years ago
- A Collection of Data sets and Approaches to UAD in Brain MRI.☆23Apr 21, 2026Updated last week
- Anonymous function creation in R and purrr☆14Jan 11, 2020Updated 6 years ago
- Codebase for Conditioned Diffusion Models for Unsupervised Anomaly Detection☆31Jan 23, 2025Updated last year
- ☆11Dec 8, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Protein sequence domain annotation with a language model☆32Apr 21, 2026Updated last week
- Awesome AI-aided Drug Discovery☆37Jun 6, 2024Updated last year
- List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.☆14Sep 3, 2016Updated 9 years ago
- Strategies to Gekko trading bot with backtests results and some useful tools.☆11May 5, 2018Updated 7 years ago
- Repository for our "RAG in Practice (2025)" event!☆17Mar 26, 2025Updated last year
- a graph layout js library depended on ogdf and emscripten☆11Dec 7, 2021Updated 4 years ago
- CBMPy is a Python based platform for constraint based modelling and analysis.☆20Apr 21, 2026Updated last week
- GpC methylation from fast5:s to reference anchored calls☆10Nov 18, 2020Updated 5 years ago
- This is the ensembldb development repository.☆36Aug 18, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Manage Files Across Sessions☆14Oct 30, 2025Updated 6 months ago
- ChIP-seq DC and QC Pipeline☆36Mar 19, 2021Updated 5 years ago
- A curated list of awesome resources for science and academia.☆23Oct 16, 2025Updated 6 months ago
- Read level DNA methylation analysis of bisulfite converted sequencing data☆19Feb 23, 2026Updated 2 months ago
- Apache Zeppelin Extension for VS Code☆17Sep 8, 2025Updated 7 months ago
- Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)☆52Aug 25, 2025Updated 8 months ago
- Project and coding tools for the Center for Innovative Design and Analysis (CIDA)☆10Updated this week
- ARCHIVED Walkability Scores☆12May 10, 2022Updated 3 years ago
- SCREW: A Reproducible Workflow for Single-Cell Epigenomics☆11Oct 22, 2017Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.☆15Mar 3, 2026Updated last month
- Single-cell Bisulfite Sequencing Data Mapping☆12May 19, 2021Updated 4 years ago
- An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants☆11Oct 24, 2019Updated 6 years ago
- Regulatory network inference and driver gene evaluation using integrative multi-omics analysis and penalized regression☆17Jan 26, 2026Updated 3 months ago
- ☆13Oct 2, 2019Updated 6 years ago
- ☆12Jun 28, 2024Updated last year