MCP server for the NCBI E-utilities API. Search PubMed, fetch article metadata, generate citations, explore MeSH terms, and discover related research. Runs over stdio or HTTP. Deployable to Cloudflare Workers.
☆64Mar 7, 2026Updated this week
Alternatives and similar repositories for pubmed-mcp-server
Users that are interested in pubmed-mcp-server are comparing it to the libraries listed below
Sorting:
- Python Phenopacket Tools☆16Nov 3, 2025Updated 4 months ago
- Testing framework for Model Context Protocol (MCP)☆28Apr 19, 2025Updated 10 months ago
- ☆33Nov 30, 2023Updated 2 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Mar 19, 2024Updated last year
- 🔍 This project implements a Model Context Protocol (MCP) server for interacting with the Semantic Scholar API. It provides tools for sea…☆53Mar 25, 2025Updated 11 months ago
- Implementation of UniSpec, a deep learning model for predicting full fragment ion peptide spectra.☆12Feb 11, 2025Updated last year
- Proteogenomics database-generation tool for protein haplotypes and variants☆11Jun 19, 2025Updated 8 months ago
- TPTP python library and benchmarking service☆13Oct 2, 2019Updated 6 years ago
- Claude Code Skill: Browse, summarize and capture AI-related YouTube videos☆40Jan 15, 2026Updated last month
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆11Mar 11, 2024Updated last year
- Analysis of Global Burden of Disease data☆12Mar 15, 2021Updated 4 years ago
- Collation of metadata examples and notes for the project☆11Jan 30, 2026Updated last month
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated this week
- REEV: Explanation and Evaluation of Variants☆11Mar 2, 2026Updated last week
- Fork to run instances from SWE-rebench☆21Feb 23, 2026Updated 2 weeks ago
- PptGPT是一款智能幻灯片生成插件,可以结合个人知识库生成精准匹配答辩、演讲、汇报场景的PPT幻灯片内容及原创配图,也可以通过润色及翻译功能修改优化PPT内容。☆14Jul 28, 2024Updated last year
- I’m trying to create something similar to Grammarly. Hail to open source!☆15Jun 5, 2025Updated 9 months ago
- Minimalist agent framework for AI engineers☆19Jan 22, 2026Updated last month
- Python functions to interact with the command line version of HBV-light☆10Jan 13, 2020Updated 6 years ago
- ☆10Feb 28, 2018Updated 8 years ago
- Chrome extension that displays motivational startup quotes☆11Oct 4, 2018Updated 7 years ago
- ☆13Mar 1, 2026Updated last week
- ☆10Aug 13, 2025Updated 6 months ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Jul 8, 2025Updated 8 months ago
- Python parser for UCUM (Unified Code for Units of Measure) incl. converter to pint units☆14Mar 1, 2026Updated last week
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated 11 months ago
- 📚 LaTeX templates and tools for creating beautiful, structured documents 📝☆14Oct 24, 2025Updated 4 months ago
- A Python interface to the Prolog pengines library. Makes it exceedingly easy to call out to SWI-Prolog within Python!☆12Jun 26, 2020Updated 5 years ago
- ☆18Jul 21, 2025Updated 7 months ago
- Ice gradient estimation for cryoEM☆11Oct 11, 2024Updated last year
- ⌨️ A tool for showing your top commands☆10Aug 25, 2024Updated last year
- A crate for working with genomics chain files.☆12Aug 6, 2025Updated 7 months ago
- TWX Proxy - an advanced gamplay helper for TradeWars 2002☆12Jun 19, 2018Updated 7 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Jan 20, 2026Updated last month
- A Python module to send out email (also with attachment) and push notifications (using pushbullet or pushover) from your applications☆10Oct 5, 2024Updated last year
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆12Apr 5, 2025Updated 11 months ago
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- ☆16Dec 17, 2025Updated 2 months ago
- Access public biological ontologies.☆15Aug 7, 2024Updated last year