linear (time,space) greedy set cover implementation
☆29Sep 16, 2021Updated 5 years ago
Alternatives and similar repositories for setcover
Users that are interested in setcover are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Sep 19, 2016Updated 10 years ago
- ☆15Aug 6, 2020Updated 6 years ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆17Oct 12, 2018Updated 8 years ago
- DartMinHash: Fast Sketching for Weighted Sets☆12Dec 8, 2025Updated 11 months ago
- An experimental tool to find approximate max-cuts in a large graph☆10Apr 28, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- De Bruijn graph representation in low memory☆36Jul 6, 2024Updated 2 years ago
- A heuristic solver for the set cover problem☆58Aug 22, 2020Updated 6 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- In-place Parallel Super Scalar Radix Sort (IPS²Ra)☆38Sep 16, 2026Updated last month
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆48Aug 11, 2021Updated 5 years ago
- Ultra fast MSD radix sorter☆10Jun 23, 2020Updated 6 years ago
- Header-only, gzread-like reader for gzip, bz2, and xz.☆11Aug 8, 2018Updated 8 years ago
- A fuzzy matching & clustering library for python.☆26Jul 17, 2025Updated last year
- TreeMinHash: Fast Sketching for Weighted Jaccard Similarity Estimation☆17Aug 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- do multiple nucleotide sequence alignment fast and accurately☆18Dec 1, 2022Updated 3 years ago
- Bloocoo is a k-mer spectrum-based read error corrector, designed to correct large datasets with a very low memory footprint.☆12May 22, 2017Updated 9 years ago
- interactive Multi Objective K-mer Analysis☆25Mar 5, 2023Updated 3 years ago
- ☆11Aug 5, 2020Updated 6 years ago
- community detection in multiplex networks☆10Apr 23, 2016Updated 10 years ago
- Cython bindings and Python interface to Jess, a 3D template matching software for protein structures. Now 10x faster!☆12Aug 25, 2026Updated 2 months ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 7 years ago
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Dec 22, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- BagMinHash - Minwise Hashing Algorithm for Weighted Sets☆26Aug 26, 2020Updated 6 years ago
- Fast and memory efficient partial order alignment with minipoa☆22Oct 16, 2026Updated 3 weeks ago
- Plugin Vi/Vim to manipulate Gromacs files (syntax highlighting, macros)☆13Feb 13, 2013Updated 13 years ago
- Parallel Lightweight Suffix Array Algorithm.☆20Dec 28, 2016Updated 9 years ago
- Generative models of chemical data for PaccMann^RL☆13Jun 2, 2023Updated 3 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆12Apr 13, 2026Updated 6 months ago
- ☆24Apr 2, 2021Updated 5 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Jan 26, 2022Updated 4 years ago
- VAE model with Transformer as backbone.☆10May 18, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for paper 'Accelerating Antimicrobial Peptide Discovery with Latent Sequence-Structure Model'☆12Mar 21, 2024Updated 2 years ago
- Yet another implementation of getline/getdelim.☆19Feb 8, 2019Updated 7 years ago
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- new repo☆28May 18, 2021Updated 5 years ago
- ☆14Jan 24, 2021Updated 5 years ago
- ☆13Mar 20, 2018Updated 8 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago