TreeMinHash: Fast Sketching for Weighted Jaccard Similarity Estimation
☆17Aug 3, 2025Updated last year
Alternatives and similar repositories for treeminhash
Users that are interested in treeminhash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- BagMinHash - Minwise Hashing Algorithm for Weighted Sets☆26Aug 26, 2020Updated 6 years ago
- ProbMinHash – A Class of Locality-Sensitive Hash Algorithms for the (Probability) Jaccard Similarity☆44Oct 26, 2020Updated 6 years ago
- DartMinHash: Fast Sketching for Weighted Sets☆12Dec 8, 2025Updated 10 months ago
- Paper about the estimation of cardinalities from HyperLogLog sketches☆65May 18, 2021Updated 5 years ago
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆48Aug 11, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A benchmark for generic, large-scale shuffle operations on continuous stream of data, implemented with state-of-the-art stream processing…☆15Apr 21, 2026Updated 6 months ago
- Compressed, associative, and exact hash table for k-mers☆11Oct 15, 2026Updated 2 weeks ago
- An experimental tool to find approximate max-cuts in a large graph☆10Apr 28, 2021Updated 5 years ago
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 4 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms☆31Jan 22, 2026Updated 9 months ago
- A Rust implementation of HyperLogLog trying to be parsimonious with memory.☆35Oct 25, 2026Updated last week
- A bit mixer, pseudo random number generator and a hash function.☆33Apr 19, 2022Updated 4 years ago
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RabbitMash: an efficient highly optimized implementation of Mash.☆20Oct 28, 2023Updated 3 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 7 years ago
- A fast, AVX2 and ARM Neon accelerated FM index library☆36Dec 9, 2024Updated last year
- Daichi Amagata and Takahiro Hara, SIGMOD2021☆15Apr 10, 2024Updated 2 years ago
- Building upon BWA-MEM2, this repository includes performance improvements to the seeding and mate-rescue steps.☆13Oct 15, 2021Updated 5 years ago
- ☆24Apr 2, 2021Updated 5 years ago
- DynaHist: A Dynamic Histogram Library for Java☆52Aug 26, 2026Updated 2 months ago
- A FASTQ lossless compression algorithm especially designed for nanopore sequencing FASTQ files.☆10Jul 2, 2020Updated 6 years ago
- A ball-tree implementation for K-NN☆18Jan 8, 2026Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- ☆23Dec 4, 2023Updated 2 years ago
- Supplementary Material to accompany the paper, DJ Warne, SA Sisson, C Drovandi (2019) Acceleration of expensive computations in Bayesian…☆13Oct 23, 2020Updated 6 years ago
- RACE sketches for kernel density estimation (KDE)☆14Jan 27, 2020Updated 6 years ago
- Interleaving bits from two sources using SIMD instructions.☆14Feb 2, 2018Updated 8 years ago
- Java implementations of the most popular and best performing consistent hashing algorithms for non-peer-to-peer contexts.☆29May 16, 2025Updated last year
- A more efficient quality control tool for sequencing data☆33May 27, 2025Updated last year
- Metagenomics microbial abundance quantification☆28Sep 22, 2022Updated 4 years ago
- The UltraPlexer is a kmer-based tool that allows assigning non-barcoded long-read sequences generated by the Oxford Nanopore Technology t…☆10Aug 16, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A HyperMinHash implementation for Redis.☆19Sep 20, 2019Updated 7 years ago
- JPEG image codec that uses SIMD instructions (MMX, SSE2, NEON, AltiVec) to accelerate baseline JPEG compression and decompression on x86,…☆10Apr 15, 2026Updated 6 months ago
- elPrep reimplementations in C++ and Java, only for benchmark comparisons☆10Feb 13, 2023Updated 3 years ago
- Visual Hash for matching copies of visually similar images.☆16Mar 17, 2025Updated last year
- Simple distribute job scheduler for multiple servers with only SSH. No additions.☆10Dec 8, 2022Updated 3 years ago
- Pan-Genomic Matching Statistics☆59Apr 3, 2024Updated 2 years ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated 2 years ago