Andy-jqa / bioelmoLinks
BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.
☆33Updated 5 years ago
Alternatives and similar repositories for bioelmo
Users that are interested in bioelmo are comparing it to the libraries listed below
Sorting:
- BioELECTRA☆50Updated 3 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆170Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 5 months ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated last year
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆196Updated 2 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- ☆25Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- Joint sentence classification-Tensorflow☆33Updated 6 years ago
- ☆91Updated 6 years ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 5 years ago
- Code for AttentionMeSH☆17Updated 6 years ago
- ☆73Updated last year
- ☆48Updated last year
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- Tools for working with the S800 corpus☆11Updated 4 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019☆51Updated 2 years ago
- Code for the emrQA question answering dataset☆151Updated 3 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- PubMed 200k RCT dataset: a large dataset for sequential sentence classification.☆197Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆68Updated 4 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆27Updated last year