Andy-jqa / bioelmo
BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.
☆33Updated 5 years ago
Alternatives and similar repositories for bioelmo:
Users that are interested in bioelmo are comparing it to the libraries listed below
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 4 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- BioELECTRA☆50Updated 3 years ago
- Tools for working with the S800 corpus☆11Updated 4 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆56Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated last month
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 8 months ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- ☆25Updated 2 years ago
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- Code for AttentionMeSH☆17Updated 6 years ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 5 years ago
- PENNER: Pattern-enhanced Nested Named Entity Recognition in Biomedical Literature (BIBM'18)☆10Updated last year
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆68Updated 3 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- ☆24Updated 3 years ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 4 years ago
- ☆90Updated 5 years ago
- ☆48Updated last year
- Joint sentence classification-Tensorflow☆33Updated 6 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019☆51Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- Bioformer: an efficient BERT model for biomedical text mining☆54Updated 2 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆27Updated last year