yardstick17 / DDIExtractionLinks
Detecting drug-drug interaction (DDI) has become a vital part of public health safety. This project is an implementation of NLP based approach for such relation extraction between entities.
☆17Updated 8 years ago
Alternatives and similar repositories for DDIExtraction
Users that are interested in DDIExtraction are comparing it to the libraries listed below
Sorting:
- Predicting adverse drug reactions from a knowledge graph☆28Updated 4 years ago
- This repository aims to track the progress in BioNER and give a related paper list and an overview of the state-of-the-art (SOTA).☆201Updated 4 years ago
- ☆50Updated 3 years ago
- The depository support training and testing BERT-CNN model on three medical relation extraction corpora: BioCreative V CDR task corpus, t…☆74Updated 6 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated last year
- ☆232Updated 8 years ago
- Turku Event Extraction System☆147Updated 6 years ago
- ☆16Updated 7 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated 2 years ago
- ☆11Updated 7 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- PDD Graph : Bridging MIMIC-III and Linked Data Cloud☆37Updated 10 months ago
- ☆122Updated 7 years ago
- BERT for TCM clinical records classification. JAMIA 2019☆47Updated 5 years ago
- Repository for student projects within biomedical text mining from Lund University☆57Updated 2 years ago
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆69Updated 4 years ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆104Updated 5 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- ☆58Updated 5 years ago
- Unsupervised domain adaptation method for relation extraction☆18Updated 7 years ago
- PyTorch Implementation of BioBERT☆346Updated 2 years ago
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆96Updated 6 years ago
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Updated 3 years ago
- Tools for working with the S800 corpus☆12Updated 5 years ago
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆40Updated 4 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- development and intrinsic evaluation of drug related word embeddings using PubMed abstracts and DrugBank☆14Updated 8 years ago
- ☆36Updated 5 years ago
- Pre-training of Graph Augmented Transformers for Medication Recommendation☆126Updated 6 years ago