An HP 2D Lattice Environment with a Gym-like API for the Protein Folding Problem
☆54Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for gym-lattice
Users that are interested in gym-lattice are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Faster, more accurate and entirely open source method for predicting contacts in proteins☆12May 21, 2018Updated 7 years ago
- DeepContact Software☆26Jun 16, 2018Updated 7 years ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 6 years ago
- Flatland Multi Agent Reinforcement Learning☆16Aug 1, 2020Updated 5 years ago
- This module includes functions that can be used to simulate mechanochemical phenomena.☆11Nov 16, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Gradients for dynamic programming☆17Nov 10, 2023Updated 2 years ago
- Note that current version does not include search of very large metagenome data. For some proteins, metagenome data is important. We will…☆99Jan 26, 2022Updated 4 years ago
- Deep convolutional networks for fold recognition☆22Nov 8, 2019Updated 6 years ago
- An interactive visual simulator for distance-based protein folding☆25Mar 1, 2021Updated 5 years ago
- Accompanying repository for Unsupervised Active Domain Randomization in Goal-Directed RL☆12Aug 4, 2020Updated 5 years ago
- Pseudo Likelihood Maximization for protein in Julia☆52May 15, 2025Updated 11 months ago
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆17Sep 30, 2024Updated last year
- SLAM using line☆27Dec 24, 2018Updated 7 years ago
- Tool for slot extraction from text☆15Oct 23, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Contact map alignment☆43Feb 3, 2021Updated 5 years ago
- Geometry generation/planning for robotically assembled spatial structures☆14Mar 23, 2023Updated 3 years ago
- A Julia package to support forward-mode auto-differentiation for fast transforms☆14Nov 12, 2025Updated 5 months ago
- ☆11Jan 1, 2022Updated 4 years ago
- Fully convolutional neural networks for protein residue-residue contact prediction☆44Mar 25, 2019Updated 7 years ago
- Implementation is mostly based on Sergey Levine work (http://www.eecs.berkeley.edu/~svlevine/).☆45Dec 11, 2014Updated 11 years ago
- ☆13Jan 12, 2021Updated 5 years ago
- Create "fly-throughs" in 3d visualization☆17Apr 21, 2026Updated last week
- Few-shot Bayesian Imitation Learning with Policies as Logic over Programs☆21Oct 19, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Adaptive Memory Prediction Framework☆15Apr 19, 2015Updated 11 years ago
- ☆14Jun 13, 2020Updated 5 years ago
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- Standardized data set for machine learning of protein structure☆914Nov 18, 2020Updated 5 years ago
- Fitness landscape exploration sandbox for biological sequence design.☆171Feb 16, 2023Updated 3 years ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Attempt at reproduction of AlphaFold2☆99Oct 23, 2024Updated last year
- Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module☆23Jan 27, 2022Updated 4 years ago
- Capsule networks can defend against adversarial attacks using reconstruction error☆13May 24, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Legendre polynomials and associated Legendre polynomials computed using 3-term recursions☆18Apr 21, 2026Updated last week
- Pulsar-plot of Strava runs in Swift 3☆12Apr 2, 2018Updated 8 years ago
- Simple matching of HTS samples based on HLA typing☆14Jan 4, 2017Updated 9 years ago
- Composable kernels for scikit-learn implemented in JAX.☆46Oct 26, 2020Updated 5 years ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆16Apr 2, 2024Updated 2 years ago
- Control theory in Haskell: Data structures, algorithms and adapters☆80Jan 14, 2019Updated 7 years ago
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆12Jun 10, 2025Updated 10 months ago