Alternatives and similar repositories for onco-aae

Users that are interested in onco-aae are comparing it to the libraries listed below

• momeara / DeepSEA
  Similarity Ensemble Approach with deep learning substance fingerprints
  ☆61Updated 8 years ago
• HIPS / molecule-autoencoder
  A project to enable optimization of molecules by transforming them to and from a continuous representation.
  ☆155Updated 8 years ago
• XericZephyr / seq2seq-fingerprint
  Official Implementation for "Seq2seq Fingerprint: An Unsupervised Deep Molecular Embedding for Drug Discovery".
  ☆39Updated 7 years ago
• GUR9000 / KerasNeuralFingerprint
  Keras-based implementation of neural fingerprints, operating on molecular graphs of arbitrary size
  ☆24Updated 8 years ago
• Bjoux2 / DeepDTIs_DBN
  Deep learning-based drug-target interaction prediction / Deep belief net (DBN) based on Theano
  ☆47Updated 6 years ago
• Gananath / DrugAI
  Generation and Classification of Drug Like molecule usings Neural Networks
  ☆66Updated 6 years ago
• SeongokRyu / Molecular-GAT
  Molecular-GAT
  ☆21Updated 7 years ago
• wengong-jin / nips17-rexgen
  Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network (NIPS 2017)
  ☆153Updated 6 years ago
• cxhernandez / molencoder
  Molecular AutoEncoder in PyTorch
  ☆90Updated 5 years ago
• songlab-cal / tape-neurips2019
  Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…
  ☆120Updated 3 years ago
• yangkevin2 / coronavirus_data
  ☆81Updated last year
• nyu-dl / conditional-molecular-design-ssvae
  ☆50Updated last year
• ddofer / ProFET
  ProFET: Protein Feature Engineering Toolkit for Machine Learning
  ☆57Updated 9 years ago
• wengong-jin / chemprop
  Chemical Property Prediction with Graph Convolutional Networks
  ☆60Updated 5 years ago
• debbiemarkslab / neural-fingerprint-theano
  Visual Convolutional Neural Graph Fingerprints in Theano/Lasagne
  ☆34Updated 8 years ago
• Hanjun-Dai / sdvae
  code for Syntax-Directed Variational Autoencoder that generates programs and molecues
  ☆78Updated 6 years ago
• ZJULearning / graph_level_drug_discovery
  ☆61Updated 6 years ago
• PeptoneLtd / dspp-keras
  Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning app…
  ☆169Updated 3 years ago
• ehsanasgari / Deep-Proteomics
  ☆51Updated 4 years ago
• alrojo / CB513
  CB513 results (world record)
  ☆30Updated 8 years ago
• duolinwang / CapsNet_PTM
  CapsNet for Protein Post-translational Modification site prediction.
  ☆25Updated 5 years ago
• bioinf-jku / binet
  Deep Learning package for Python
  ☆25Updated 7 years ago
• keiserlab / keras-neural-graph-fingerprint
  Keras implementation of Neural Graph Fingerprints as proposed by Duvenaud et al., 2015
  ☆46Updated 6 years ago
• simonfqy / PADME
  This is the repository containing the source code for my Master's thesis research, about predicting drug-target interaction using deep le…
  ☆42Updated 6 years ago
• gablg1 / ORGAN
  Objective-Reinforced Generative Adversarial Networks (ORGAN) for Sequence Generation Models
  ☆241Updated 2 years ago
• kyu999 / biovec
  A new approach for representing biological sequences
  ☆99Updated 9 months ago
• fllinares / neural_fingerprints_tf
  A TensorFlow implementation of "Convolutional Networks on Graphs for Learning Molecular Fingerprints".
  ☆31Updated 7 years ago
• pfnet-research / hierarchical-molecular-learning
  Implementation of "Semi-supervised learning of hierarchical representations of molecules using neural message passing" (arXiv:1711.10168)
  ☆14Updated 7 years ago
• bioinf-jku / interpretable_ml_drug_discovery
  Interpreting graph convolutional filters of target prediction network
  ☆48Updated 6 years ago
• QData / DeepMotif
  Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications
  ☆46Updated 6 years ago