☆15Sep 5, 2025Updated last year
Alternatives and similar repositories for impute-first
Users that are interested in impute-first are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reference bias measuring toolkit☆22Mar 12, 2026Updated 7 months ago
- An SV caller from paired-end NGS data.☆19Updated this week
- R-Index-F Library for Pattern Matching☆12Aug 8, 2024Updated 2 years ago
- Twitter script for gathering tweets from Twitter stream and save them on a CSV file☆16Jan 19, 2020Updated 6 years ago
- Fast Approximate Pattern Matching using Search Schemes☆20Jul 11, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A machine learning-based genotyping tool for structural variation in short reads☆27Sep 15, 2025Updated last year
- Mapping-free software for fishing relevant reads in an RNA-Seq sample☆19Dec 9, 2020Updated 5 years ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆140Updated this week
- Bot that follows everyone who follows the target user(s)☆19Sep 25, 2020Updated 6 years ago
- Emotion Detection & Classification of Tweets Using Streaming APIs. [NLTK] [Scikit Learn] [Twitter Streaming API] [Bing API]☆14Jan 9, 2018Updated 8 years ago
- ARG-Needle library for representing and analyzing ancestral recombination graphs (ARGs)☆10Nov 21, 2025Updated 11 months ago
- Implementations of syncmer-based long read mappers☆10Mar 8, 2024Updated 2 years ago
- ☆10Nov 20, 2025Updated 11 months ago
- ☆11Feb 25, 2026Updated 8 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A method to locate variation clusters☆11Nov 27, 2025Updated 11 months ago
- kir-mapper is a toolkit for calling SNPs, alleles, and haplotypes for KIR genes from short-read second-generation sequencing (NGS) data.☆12Aug 13, 2026Updated 2 months ago
- Docker image as base for building full MAKER image☆11Feb 28, 2022Updated 4 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 3 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Identify which human reference genome was used to align a BAM/SAM/CRAM file☆34Jul 19, 2026Updated 3 months ago
- 🧮 🔢 Generate multi-sample k-mer count matrix from WGS☆11Jan 17, 2026Updated 9 months ago
- H2M is a Python pipeline for precise modeling of human variants in the mouse genome.☆15Oct 9, 2026Updated 3 weeks ago
- Bit packed vector of integral values☆29Jan 28, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A transposition caller.☆12Oct 5, 2023Updated 3 years ago
- ADEPT: Automated molecular Dynamics Engine for Polymer simulaTions☆17Jun 27, 2026Updated 4 months ago
- A tour of the Julia programming language, inspired by Go☆12Oct 15, 2017Updated 9 years ago
- Snakemake workflow for the vg toolkit.☆12Mar 19, 2026Updated 7 months ago
- personal genome constructor☆11May 29, 2025Updated last year
- Genomics workflows for CPG using Hail Batch☆12Sep 8, 2026Updated last month
- genotyping by Mapping-free ALternate-allele detection of known VAriants☆10Mar 6, 2023Updated 3 years ago
- ☆11Feb 14, 2023Updated 3 years ago
- ☆13Dec 10, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- DeepRegFinder is a deep learning based program used to identify DNA regulatory elements using ChIP-seq☆12Mar 28, 2024Updated 2 years ago
- calculate multiple MD5 using multiple threads☆13Apr 16, 2021Updated 5 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆11Feb 24, 2023Updated 3 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆30Sep 9, 2021Updated 5 years ago
- non-reference transposable element detection using sTELLeR☆13Nov 6, 2024Updated 2 years ago
- MUSET. Set of utilities for the construction of abundance unitig matrices from sequencing data☆11Jun 1, 2026Updated 5 months ago
- Ultrafast and powerful eGene identification method☆10Jul 17, 2025Updated last year