Alternatives and similar repositories for TDA-and-Neuro:

Users that are interested in TDA-and-Neuro are comparing it to the libraries listed below

• SaberaTalukder / Chen_Institute_DataSAI_for_Neuroscience
  ☆29Updated 2 years ago
• davindicode / cosyne-2023-generative-models
  Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.
  ☆39Updated 2 years ago
• brain-modelling-group / neural-flows
  Estimation, analysis and decomposition of brainwave spatiotemporal dynamics
  ☆28Updated 3 years ago
• catniplab / latent_dynamics_workshop
  Exercises and examples for the latent dynamics workshop
  ☆17Updated last year
• erikher / GridCellTorus
  ☆30Updated last year
• Dynamics-of-Neural-Systems-Lab / MARBLE
  Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…
  ☆62Updated last month
• lindermanlab / PPSeq.jl
  Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains
  ☆66Updated last year
• awillats / dynamics-in-neuro-reading-list
  This reading list is centered around the practical application of linear dynamical systems models to predict neural data
  ☆38Updated 3 years ago
• scikit-tda / DREiMac
  Dimensionality Reduction with Eilenberg-MacLane Coordinates
  ☆40Updated this week
• pillowlab / GLMspiketraintutorial_python
  ☆49Updated 2 years ago
• brian-team / brian2modelfitting
  Model fitting toolbox for the Brian 2 simulator
  ☆15Updated last year
• SainsburyWellcomeCentre / NeuralPlayground
  The standardised environment for the hippocampus and entorhinal cortex models
  ☆69Updated last week
• lyprince / lfads_demo
  Pytorch implementation of LFADS for demo at CAN workshop
  ☆19Updated 5 years ago
• jaxleyverse / jaxley
  Differentiable neuron simulations with biophysical detail on CPU, GPU, or TPU.
  ☆89Updated this week
• jbakermans / ManifoldTutorial
  Matlab exercises with solutions to implement and visualise concepts from Sara Solla's talk on World Wide Neuro (Apr 29, 2020)
  ☆20Updated 4 years ago
• DurstewitzLab / dendPLRNN
  ☆20Updated last year
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆49Updated last month
• rajanlab / CURBD
  Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
  ☆52Updated 4 years ago
• gamaleldin / TME
  This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …
  ☆18Updated 7 years ago
• TuragaLab / flyvis
  A connectome-constrained deep mechanistic network (DMN) model of the fruit fly visual system in PyTorch.
  ☆55Updated 2 months ago
• ComputationalPsychiatry / pyhgf
  PyHGF: A neural network library for predictive coding
  ☆70Updated 2 weeks ago
• dougollerenshaw / figrid
  Utilities for formatting matplotlib figures
  ☆31Updated last month
• patrickmineault / big-neuro-ideas
  An ongoing journal club for the study of big ideas in neuro
  ☆33Updated 2 years ago
• slinderman / stats320
  STATS320: Statistical Methods for Neural Data Analysis
  ☆194Updated this week
• sompolinsky-lab / dnn-object-manifolds
  ☆48Updated 3 years ago
• xjwanglab / book
  ☆23Updated 5 months ago
• schultzlab / Neural_Manifolds
  A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…
  ☆25Updated last year
• morales-gregorio / neural_trefoil_animation
  Animation of population dynamics following a Trefoil knot
  ☆21Updated 2 years ago
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆33Updated last year
• yu-takagi / dSCA
  Demixed Shared Component Analysis
  ☆13Updated 4 years ago