Understand the Gillespie algorithm and build it yourself in Python
☆24Feb 23, 2018Updated 8 years ago
Alternatives and similar repositories for gillespie-algorithm-python
Users that are interested in gillespie-algorithm-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gillespie Stochastic Simulation Algorithm☆14Jun 29, 2013Updated 13 years ago
- DNA Archive Simulator (DNArSim) is a memory channel model that simulate the entire DNA Data Storage process: from synthesis to basecallin…☆10Dec 6, 2021Updated 4 years ago
- ☆12Apr 26, 2020Updated 6 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 5 months ago
- Agents for Claude Code☆23May 6, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Sep 24, 2025Updated 11 months ago
- Python image tiling library for image processing, object detection, etc.☆12Jul 25, 2024Updated 2 years ago
- ☆10Sep 29, 2022Updated 3 years ago
- Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data☆14Dec 24, 2023Updated 2 years ago
- Pathogen evolution, selection and immunity☆47Mar 5, 2024Updated 2 years ago
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 8 years ago
- Open Source Differential Equation Book (Creative Commons License)☆14Aug 27, 2018Updated 8 years ago
- This is a C version of the SCF code found in Appendix B of Modern Quantum Chemistry, An Introduction to Electronic Structure Theory by A.…☆10Jan 1, 2019Updated 7 years ago
- SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity☆11Jun 21, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A minimal Python-based assembler for multiple architectures.☆15Apr 25, 2025Updated last year
- Factorize metagenotypes to infer strains and their abundances☆12Sep 29, 2024Updated last year
- interactive phylogenetic tree viewer☆11Jun 26, 2024Updated 2 years ago
- DNA-based End-to-End Encrypted EFS Database created using Python 🧬☆10Dec 21, 2023Updated 2 years ago
- Tutorial at EuroSciPy 2019/2022☆11Aug 15, 2023Updated 3 years ago
- Document binarization using deep learning☆10Dec 31, 2020Updated 5 years ago
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 8 months ago
- Train a language model using subtitles from all the Harry Potter films.☆12Jan 31, 2017Updated 9 years ago
- SpydrPick: mutual information based detection of pairs of genomic loci co-evolving under a shared selective pressure.☆16Apr 29, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆19Nov 2, 2018Updated 7 years ago
- An implementation of a neural network training routine using derivative information in Pytorch.☆11Dec 19, 2020Updated 5 years ago
- Convert QIIME files into Oligotyping subsets.☆15Dec 10, 2014Updated 11 years ago
- ☆12May 31, 2021Updated 5 years ago
- LDPC codes for Illumina sequencing-based DNA storage☆11Dec 2, 2020Updated 5 years ago
- SNUPI (Structured NUcleic-acids Programming Interface)☆16Feb 19, 2025Updated last year
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Nov 3, 2021Updated 4 years ago
- The matching routine for interologs identification based on co-evolution☆11Jul 17, 2018Updated 8 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Recreation of the DNA Sequence Classification Paper☆12Oct 27, 2016Updated 9 years ago
- Python implementation of Varshamov-Tenengolts codes for correction of single insertion/deletion errors☆13Aug 13, 2020Updated 6 years ago
- 🧬 Analyzing compression algorithms for genomic sequencing data☆12Feb 14, 2020Updated 6 years ago
- User interface to perform quantum transport calculations with non equilibrium Green's functions☆14Aug 14, 2018Updated 8 years ago
- NumPy aware dynamic Python compiler using LLVM☆12Nov 7, 2024Updated last year
- Maximum-likelihood parameter estimation for terahertz time-domain spectroscopy☆12May 30, 2021Updated 5 years ago
- Simulations for light-pulse atom interferometry☆15Updated this week