Understand the Gillespie algorithm and build it yourself in Python
☆24Feb 23, 2018Updated 8 years ago
Alternatives and similar repositories for gillespie-algorithm-python
Users that are interested in gillespie-algorithm-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UCSF BMI219 Deep Learning (2017), Coding example (Prediction of protein folding with RNN and CNN)☆16May 10, 2017Updated 8 years ago
- Other than papers from big-name labs and universities, most AI research papers get less than 10 readers, even though there might be gems …☆15Jul 20, 2018Updated 7 years ago
- Quasiclassical and classical dynamics with Gaussian☆13Apr 26, 2021Updated 5 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated last month
- Python image tiling library for image processing, object detection, etc.☆12Jul 25, 2024Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆15Aug 23, 2021Updated 4 years ago
- ☆10Sep 29, 2022Updated 3 years ago
- Calculate allowed interactions in QED☆10Nov 2, 2022Updated 3 years ago
- Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data☆14Dec 24, 2023Updated 2 years ago
- Pathogen evolution, selection and immunity☆45Mar 5, 2024Updated 2 years ago
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 7 years ago
- SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity☆11Jun 21, 2024Updated last year
- Run NASA's General Mission Analysis Tool (GMAT) from Julia☆10Sep 3, 2020Updated 5 years ago
- interactive phylogenetic tree viewer☆11Jun 26, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Open Source Differential Equation Book (Creative Commons License)☆14Aug 27, 2018Updated 7 years ago
- Tutorial at EuroSciPy 2019/2022☆11Aug 15, 2023Updated 2 years ago
- Document binarization using deep learning☆10Dec 31, 2020Updated 5 years ago
- Basic implementation 4th order Runge Kutta method for ODE's☆11Oct 27, 2021Updated 4 years ago
- An implementation of a neural network training routine using derivative information in Pytorch.☆10Dec 19, 2020Updated 5 years ago
- DNA-based End-to-End Encrypted EFS Database created using Python 🧬☆11Dec 21, 2023Updated 2 years ago
- A simple script to plot the Roofline model for given HW platforms and applications☆10Mar 17, 2026Updated last month
- Manage a big amount of Git Repositories☆27Mar 7, 2019Updated 7 years ago
- The matching routine for interologs identification based on co-evolution☆11Jul 17, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Networkx implementation of the SIS epidemic model for large and heterogeneous networks☆18Aug 12, 2023Updated 2 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 7 years ago
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Nov 3, 2021Updated 4 years ago
- Recreation of the DNA Sequence Classification Paper☆12Oct 27, 2016Updated 9 years ago
- Python implementation of Varshamov-Tenengolts codes for correction of single insertion/deletion errors☆13Aug 13, 2020Updated 5 years ago
- Classify DNA sequence into Binary class using different Classification algorithms.☆11Feb 24, 2024Updated 2 years ago
- 2D Ising model in C++, including IPython notebook examples☆11Nov 14, 2019Updated 6 years ago
- NumPy aware dynamic Python compiler using LLVM☆12Nov 7, 2024Updated last year
- This is a C version of the SCF code found in Appendix B of Modern Quantum Chemistry, An Introduction to Electronic Structure Theory by A.…☆10Jan 1, 2019Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- This is a Python implementation of the sequence design algorithm DAEDALUS for scaffolded DNA origami☆19Feb 23, 2024Updated 2 years ago
- TAMkin is a post-processing toolkit for thermochemistry and kinetics analysis.☆23Nov 20, 2023Updated 2 years ago
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 4 months ago
- 🧬 Analyzing compression algorithms for genomic sequencing data☆12Feb 14, 2020Updated 6 years ago
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆16Oct 11, 2021Updated 4 years ago
- Tight-binding calculations in Mathematica☆14Dec 18, 2025Updated 4 months ago
- Simulations for light-pulse atom interferometry☆14Apr 27, 2026Updated last week