HIPPO 🦛 is an explainable AI method and toolkit for weakly-supervised models in computational pathology. It enables hypothesis testing on tissue and searching for high-effect and low-effect tissue regions.
☆17Jan 15, 2025Updated last year
Alternatives and similar repositories for HIPPO
Users that are interested in HIPPO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Jan 16, 2023Updated 3 years ago
- Benchmarking toolkit for patch-based histopathology image classification.☆44Jun 2, 2023Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆80Feb 4, 2025Updated last year
- Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)☆28Sep 26, 2022Updated 3 years ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆18Apr 8, 2025Updated last year
- Predicting Ovarian Cancer Treatment Response in Histopathology using Hierarchical Vision Transformers and Multiple Instance Learning☆12Nov 29, 2023Updated 2 years ago
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆118Jun 19, 2023Updated 2 years ago
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆23Oct 1, 2025Updated 6 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆73Nov 21, 2022Updated 3 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆115Jan 24, 2025Updated last year
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29May 21, 2024Updated last year
- SI-MIL☆36Jan 3, 2025Updated last year
- ☆26Mar 12, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Federated Learning for Computational Pathology - Medical Image Analysis☆50Feb 9, 2022Updated 4 years ago
- Pseudo-Bag Mixup Augmentation for Multiple Instance Learning-Based Whole Slide Image Classification (IEEE TMI 2024)☆67Mar 17, 2025Updated last year
- [CVPR 2025] 2DMamba: Efficient State Space Model for Image Representation☆81Jan 29, 2026Updated 2 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated last year
- HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇☆23Feb 29, 2024Updated 2 years ago
- ☆46Jan 10, 2022Updated 4 years ago
- Official repository for PLISM robustness benchmark of pathology foundation models (MICCAI 2025)☆21Updated this week
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 3 years ago
- ☆21Dec 30, 2025Updated 3 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Tutorial to start working with Multiple Instance Learning☆14Jul 5, 2023Updated 2 years ago
- Python script to comvert Philips iSyntax files to OME-TIFF☆14Dec 30, 2022Updated 3 years ago
- ☆19Feb 5, 2025Updated last year
- [MICCAI 2024 🔥] HLSS, the first study to explore hierarchical information inherent in histopathology images and their language descripti…☆27Aug 5, 2024Updated last year
- List of QuPath scripts for alignment and stain deconvolution of whole-slide histology images☆27Dec 5, 2022Updated 3 years ago
- NOVA: An agentic framework for automated histopathology analysis and discovery☆24Nov 24, 2025Updated 4 months ago
- Image-translation-assisted segmentation in 3D☆28Mar 14, 2022Updated 4 years ago
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆619Mar 19, 2024Updated 2 years ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆113Oct 15, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Instance-based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image-MICCAI 2021☆15Dec 26, 2023Updated 2 years ago
- ☆19Oct 12, 2022Updated 3 years ago
- Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PL…☆375Sep 20, 2023Updated 2 years ago
- A free and opensource yolov8, yolo11 and yolo26 all in one training tool that automates file structure and yaml files, auto labeling with…☆35Feb 26, 2026Updated last month
- ☆20Jul 15, 2022Updated 3 years ago
- ☆32Nov 1, 2022Updated 3 years ago
- 机器学习(Machine Learning)、深度学习(Deep Learning)、对抗神经网络(GAN），图神经网络（GNN），NLP，大数据相关的发展路书(roadmap), 并附海量源码（python，pytorch）带大家消化基本知识点，突破面试，完成从新手到合格…☆10Feb 25, 2020Updated 6 years ago