HIPPO 🦛 is an explainable AI method and toolkit for weakly-supervised models in computational pathology. It enables hypothesis testing on tissue and searching for high-effect and low-effect tissue regions.
☆20Jan 15, 2025Updated last year
Alternatives and similar repositories for HIPPO
Users that are interested in HIPPO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Benchmarking toolkit for patch-based histopathology image classification.☆44Jun 2, 2023Updated 3 years ago
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆22Oct 1, 2025Updated 11 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆83Feb 4, 2025Updated last year
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆23Jan 16, 2023Updated 3 years ago
- Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)☆28Sep 26, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Benchmark for pathology foundation models robustness to non-biological medical center differences.☆33Updated this week
- ☆22Jan 6, 2026Updated 8 months ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 5 years ago
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆120Jun 19, 2023Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆75Nov 21, 2022Updated 3 years ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆158Feb 5, 2026Updated 7 months ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆30May 21, 2024Updated 2 years ago
- Histology Analysis Pipeline.PY☆30Jul 1, 2026Updated 2 months ago
- Predicting Ovarian Cancer Treatment Response in Histopathology using Hierarchical Vision Transformers and Multiple Instance Learning☆13Nov 29, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- SI-MIL☆36Jan 3, 2025Updated last year
- ☆21Aug 10, 2026Updated last month
- Robust quad-tree based registration on whole slide images☆20Apr 2, 2025Updated last year
- Pseudo-Bag Mixup Augmentation for Multiple Instance Learning-Based Whole Slide Image Classification (IEEE TMI 2024)☆70Mar 17, 2025Updated last year
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated 2 years ago
- HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇☆22Feb 29, 2024Updated 2 years ago
- Federated Learning for Computational Pathology - Medical Image Analysis☆49Feb 9, 2022Updated 4 years ago
- ☆45Jan 10, 2022Updated 4 years ago
- A homework of literature review about learning what deep learning doing in biomed field.☆13Oct 5, 2025Updated 11 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 3 years ago
- Interactive Segmentation of Nucleus☆68Nov 22, 2022Updated 3 years ago
- Image-translation-assisted segmentation in 3D☆28Mar 14, 2022Updated 4 years ago
- Python script to comvert Philips iSyntax files to OME-TIFF☆14Dec 30, 2022Updated 3 years ago
- [MICCAI 2024 🔥] HLSS, the first study to explore hierarchical information inherent in histopathology images and their language descripti…☆28Aug 5, 2024Updated 2 years ago
- List of QuPath scripts for alignment and stain deconvolution of whole-slide histology images☆28Dec 5, 2022Updated 3 years ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆116Oct 15, 2024Updated last year
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆619Mar 19, 2024Updated 2 years ago
- Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PL…☆380Sep 20, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 机器学习(Machine Learning)、深度学习(Deep Learning)、对抗神经网络(GAN),图神经网络(GNN),NLP,大数据相关的发展路书(roadmap), 并附海量源码(python,pytorch)带大家消化基本知识点,突破面试,完成从新手到合格…☆10Feb 25, 2020Updated 6 years ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆68Feb 18, 2025Updated last year
- Instance-based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image-MICCAI 2021☆15Dec 26, 2023Updated 2 years ago
- Demographic bias in misdiagnosis by computational pathology models - Nature Medicine☆16Apr 29, 2024Updated 2 years ago
- ☆19Oct 12, 2022Updated 3 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Jun 17, 2023Updated 3 years ago
- Solid Tumor Associative Modeling in Pathology☆130Aug 21, 2026Updated last month