joonan-lab / hail_tutorialLinks
☆14Updated 2 years ago
Alternatives and similar repositories for hail_tutorial
Users that are interested in hail_tutorial are comparing it to the libraries listed below
Sorting:
- 유전학자를 위한 시퀀싱 자료 분석☆23Updated 4 years ago
- 충남대학교 김준 연구실 튜토리얼☆39Updated 7 months ago
- SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the n…☆163Updated last week
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆93Updated 4 years ago
- Microbial analysis in TCGA data☆91Updated last year
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆32Updated 4 years ago
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆139Updated 11 months ago
- ☆37Updated 2 years ago
- Introduction to bulk RNA-seq☆119Updated 3 months ago
- A continually expanding collection of cancer genomics notes and data☆107Updated 2 weeks ago
- A short tutorial on how to use RSEM☆137Updated 5 years ago
- Analysis pipeline for ATAC-seq data☆68Updated last year
- Batch effect adjustment based on negative binomial regression for RNA sequencing count data☆184Updated 4 years ago
- Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)☆234Updated last month
- My youtube programming scripts☆57Updated 6 months ago
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago
- Step-by-step analysis pipeline for RNA-seq data☆135Updated last year
- [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data☆140Updated last year
- my notes for scATACseq analysis☆129Updated last year
- ☆94Updated 3 months ago
- Pangolin is a deep-learning method for predicting splice site strengths.☆76Updated last year
- ☆116Updated last year
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆98Updated 3 years ago
- ☆41Updated 2 weeks ago
- ☆65Updated last year
- circular RNA analysis toolset☆85Updated 11 months ago
- predicting expression effects of human genome variants ab initio from sequence☆128Updated 6 months ago
- Annotates variants in MAF with OncoKB annotation.☆133Updated 3 weeks ago
- Integrative pathway enrichment analysis of multivariate omics data☆114Updated last month
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆111Updated 11 months ago