joonan-lab / hail_tutorialLinks
☆14Updated 3 years ago
Alternatives and similar repositories for hail_tutorial
Users that are interested in hail_tutorial are comparing it to the libraries listed below
Sorting:
- 유전학자를 위한 시퀀싱 자료 분석☆23Updated 5 years ago
- 충남대학교 김준 연구실 튜토리얼☆40Updated 10 months ago
- SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the n…☆166Updated last week
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆31Updated 4 years ago
- Batch effect adjustment based on negative binomial regression for RNA sequencing count data☆196Updated 5 years ago
- Analysis pipeline for ATAC-seq data☆78Updated 2 years ago
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago
- Step-by-step analysis pipeline for RNA-seq data☆148Updated 2 years ago
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆146Updated last year
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆101Updated 5 years ago
- Microbial analysis in TCGA data☆92Updated last year
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆118Updated 3 years ago
- A short tutorial on how to use RSEM☆138Updated 5 years ago
- Introduction to bulk RNA-seq☆123Updated 6 months ago
- A continually expanding collection of cancer genomics notes and data☆108Updated 3 weeks ago
- Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)☆239Updated 4 months ago
- Annotates variants in MAF with OncoKB annotation.☆136Updated 3 months ago
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆233Updated last month
- We help each other to study single-cell data☆16Updated 9 months ago
- ☆99Updated last month
- T/B cell receptor sequencing analysis notes☆267Updated 11 months ago
- AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …☆155Updated last year
- ☆38Updated 3 years ago
- circular RNA analysis toolset☆85Updated last year
- [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data☆141Updated last year
- A tool for detecting somatic variants in single cell data☆215Updated last year
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆97Updated 4 years ago
- ☆142Updated 7 years ago
- predicting expression effects of human genome variants ab initio from sequence☆132Updated 9 months ago
- microRNA profiling pipeline☆79Updated 3 years ago