joonan-lab / hail_tutorialLinks
☆14Updated 3 years ago
Alternatives and similar repositories for hail_tutorial
Users that are interested in hail_tutorial are comparing it to the libraries listed below
Sorting:
- 유전학자를 위한 시퀀싱 자료 분석☆23Updated 5 years ago
- 충남대학교 김준 연구실 튜토리얼☆45Updated last year
- SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the n…☆175Updated last week
- Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)☆246Updated last week
- Annotates variants in MAF with OncoKB annotation.☆140Updated last month
- Microbial analysis in TCGA data☆94Updated last year
- Introduction to bulk RNA-seq☆136Updated 9 months ago
- A short tutorial on how to use RSEM☆138Updated 5 years ago
- A continually expanding collection of cancer genomics notes and data☆116Updated this week
- Analysis pipeline for ATAC-seq data☆85Updated 2 years ago
- A python extension for quick access to bigWig and bigBed files☆239Updated 3 weeks ago
- Step-by-step analysis pipeline for RNA-seq data☆162Updated 2 years ago
- code to run sei and obtain sei and sequence class predictions☆111Updated 3 years ago
- ☆101Updated 4 months ago
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆153Updated last year
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆250Updated 3 weeks ago
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆34Updated 5 years ago
- circular RNA analysis toolset☆87Updated last year
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆118Updated 5 years ago
- Resource list and preparation instructions for online learning and teaching for Bioinformatics☆19Updated 2 years ago
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆161Updated last month
- T/B cell receptor sequencing analysis notes☆273Updated last year
- predicting expression effects of human genome variants ab initio from sequence☆132Updated last year
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆173Updated 4 years ago
- Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.☆235Updated this week
- ☆40Updated 3 years ago
- Discovering known and novel miRNAs from small RNA sequencing data☆158Updated last month
- Batch effect adjustment based on negative binomial regression for RNA sequencing count data☆201Updated 5 years ago
- 🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.☆203Updated 5 years ago
- What you need to process the Quarterly DepMap-Omics releases from Terra☆125Updated this week