Alternatives and similar repositories for hail_tutorial

Users that are interested in hail_tutorial are comparing it to the libraries listed below

• JunKim-Worms / sequencing_for_genetics
  유전학자를 위한 시퀀싱 자료 분석
  ☆23Updated 4 years ago
• JunKimCNU / JunKimLabTutorial
  충남대학교 김준 연구실 튜토리얼
  ☆38Updated 6 months ago
• AlexandrovLab / SigProfilerExtractor
  SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the n…
  ☆162Updated last week
• hbctraining / Intro-to-bulk-RNAseq
  Introduction to bulk RNA-seq
  ☆114Updated 2 months ago
• RabadanLab / arcasHLA
  Fast and accurate in silico inference of HLA genotypes from RNA-seq
  ☆138Updated 10 months ago
• erilu / bulk-rnaseq-analysis
  A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…
  ☆90Updated 4 years ago
• bli25 / RSEM_tutorial
  A short tutorial on how to use RSEM
  ☆137Updated 5 years ago
• oncokb / oncokb-annotator
  Annotates variants in MAF with OncoKB annotation.
  ☆132Updated 3 weeks ago
• liulab-dfci / MAGeCK
  Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…
  ☆32Updated 4 years ago
• CebolaLab / RNA-seq
  Step-by-step analysis pipeline for RNA-seq data
  ☆130Updated last year
• YangLab / CIRCexplorer2
  circular RNA analysis toolset
  ☆84Updated 10 months ago
• mdozmorov / Cancer_notes
  A continually expanding collection of cancer genomics notes and data
  ☆107Updated 2 months ago
• CebolaLab / ATAC-seq
  Analysis pipeline for ATAC-seq data
  ☆63Updated last year
• zhangyuqing / ComBat-seq
  Batch effect adjustment based on negative binomial regression for RNA sequencing count data
  ☆182Updated 4 years ago
• FunctionLab / sei-framework
  code to run sei and obtain sei and sequence class predictions
  ☆105Updated 2 years ago
• YeoLab / eCLIP
  ☆37Updated 2 years ago
• broadinstitute / ichorCNA
  Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
  ☆185Updated last year
• biocore / tcga
  Microbial analysis in TCGA data
  ☆91Updated last year
• virajbdeshpande / AmpliconArchitect
  AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …
  ☆147Updated last year
• hbctraining / bioinformatics_online
  Resource list and preparation instructions for online learning and teaching for Bioinformatics
  ☆19Updated last year
• mskcc / RNAseqDB
  ☆141Updated 7 years ago
• broadinstitute / ABC-Enhancer-Gene-Prediction
  Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
  ☆234Updated 3 weeks ago
• sztup / scarHRD
  ☆116Updated last year
• TrinityCTAT / Trinity_CTAT
  ☆117Updated last year
• hbctraining / Investigating-chromatin-biology-ChIPseq
  ☆94Updated 2 months ago
• cortes-ciriano-lab / SComatic
  A tool for detecting somatic variants in single cell data
  ☆208Updated 10 months ago
• crazyhottommy / TCR-BCR-seq-analysis
  T/B cell receptor sequencing analysis notes
  ☆259Updated 7 months ago
• hbctraining / Intro-to-rnaseq-hpc-O2
  This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
  ☆170Updated 4 years ago
• gagneurlab / drop
  Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
  ☆149Updated last week
• deeptools / pyBigWig
  A python extension for quick access to bigWig and bigBed files
  ☆233Updated 6 months ago