CoBrALab / MAGeTbrainLinks
Multiple Automatically Generated Templates brain segmentation algorithm
☆50Updated last year
Alternatives and similar repositories for MAGeTbrain
Users that are interested in MAGeTbrain are comparing it to the libraries listed below
Sorting:
- Automated Fiber Quantification☆77Updated last year
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆20Updated 4 years ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 9 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆100Updated last month
- niimath - a clone of fslmaths. Try the live demo:☆66Updated this week
- Processing tools for high-resolution neuroimaging☆71Updated 8 months ago
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆46Updated this week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated last month
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆70Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆69Updated last year
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆46Updated 4 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆59Updated 10 months ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆112Updated 6 months ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆45Updated 12 years ago
- Preprocessing of diffusion MRI☆160Updated this week
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated last month
- DICOM to NIfTI conversion, NIfTI tools☆100Updated 11 months ago
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆95Updated 4 months ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Updated 9 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated last week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- 3D MRI data exploration and segmentation tool.☆75Updated 2 years ago
- CIVET Installer☆29Updated 3 years ago
- Curated list of open-access databases with human structural MRI data☆129Updated 6 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated last week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆44Updated last week
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- dMRI based fiber tracking using parallel transport tractography☆26Updated last month
- Configurable Pipeline for the Analysis of Connectomes