Alternatives and similar repositories for MeshNet

Users that are interested in MeshNet are comparing it to the libraries listed below

• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆25Updated 3 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆48Updated 3 weeks ago
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆27Updated last month
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆16Updated 3 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆66Updated last year
• benoitberanger / niix2bids
  Automatic BIDS architecture
  ☆14Updated 9 months ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆49Updated 11 months ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆44Updated 12 years ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆50Updated 10 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆71Updated this week
• ntustison / CrossLong
  Nature is a language---can't you read?
  ☆12Updated 3 years ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆46Updated 4 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 7 months ago
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 3 years ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆40Updated 3 weeks ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 6 months ago
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆52Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 11 months ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆38Updated 2 years ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆92Updated 2 months ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆56Updated 8 months ago
• HumanBrainED / NHP-BrainExtraction
  ☆38Updated 3 years ago
• nipreps / nibabies
  fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
  ☆32Updated last week
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated 9 months ago
• DevelopmentalImagingMCRI / karawun
  Convert tractography studies from mrtrix into dicom for use in navigation software
  ☆15Updated 3 months ago
• ncullen93 / neuroCombat
  Harmonizing neuroimaging data across scanners and sites
  ☆34Updated 4 years ago
• neurabenn / precon_all
  precon_all surface pipline
  ☆22Updated last week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆62Updated last week