insitro / redunLinks
Yet another redundant workflow engine
☆559Updated last week
Alternatives and similar repositories for redun
Users that are interested in redun are comparing it to the libraries listed below
Sorting:
- Your data - interactive!☆330Updated 2 months ago
- a python bioinformatics framework☆168Updated this week
- Scalable genetics toolkit☆265Updated last month
- Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.☆276Updated last month
- Work with bioinformatic files using Arrow, Polars, and/or DuckDB☆190Updated 7 months ago
- Unified biological sequence manipulation in Python☆207Updated last year
- A high-performance, Pythonic language for bioinformatics☆705Updated 2 years ago
- ORM and toolkit to help keep your Benchling schemas and downstream dependencies in sync.☆49Updated 2 weeks ago
- Rapid builds of small Conda-based containers using micromamba.☆288Updated last week
- This is the development home of the workflow management system Snakemake. For general information, see☆2,617Updated last week
- Draw UpSet plots with Matplotlib☆367Updated last year
- Grayskull - Recipe generator for Conda☆356Updated last week
- A versatile DNA sequence optimizer☆248Updated 5 months ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆223Updated 3 months ago
- Workflow Description Language developer tools & local runner☆195Updated last week
- Foam low-code for coders app development framework☆19Updated last year
- Common Workflow Language reference implementation☆357Updated this week
- Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.☆125Updated this week
- A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.☆919Updated this week
- An open source platform for managing and analyzing biomedical big data☆410Updated this week
- A guided, intuitive introduction to genomics for software engineers. Curated by the community.☆384Updated last year
- A minimalist tree plotting library using toyplot graphs☆180Updated last month
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆205Updated this week
- Interactive 2D scatter plot widget for Jupyter Lab and Notebook. Scales to millions of points!☆445Updated last week
- A declarative interactive genomics visualization library for Python.☆229Updated 3 weeks ago
- Create, manage, and run Jupyter notebooks with their dependencies☆301Updated 3 months ago
- Lightweight lockfile for conda environments☆537Updated this week
- Access to Biological Web Services from Python.☆318Updated 2 weeks ago
- A Go package for engineering organisms.☆712Updated last year
- Quickly search, compare, and analyze genomic and metagenomic data sets.☆524Updated this week