Alternatives and similar repositories for liminal-orm

Users that are interested in liminal-orm are comparing it to the libraries listed below

• awslabs / aws-healthomics-tools
  ☆39Updated last week
• aws-samples / aws-healthomics-tutorials
  ☆85Updated last week
• ProteomicsML / ProteomicsML
  Community-curated tutorials and datasets for ML in proteomics
  ☆55Updated last month
• sphinxbio / platechain
  LLMs for microplate data
  ☆43Updated last year
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆62Updated this week
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆35Updated 4 months ago
• modernatx / seqlike
  Unified biological sequence manipulation in Python
  ☆207Updated last year
• dgretton / pyhamilton
  Python for Hamilton liquid handling robots
  ☆172Updated 2 weeks ago
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆54Updated this week
• laminlabs / lamindb
  A data framework for biology. Makes your data queryable, traceable, reproducible, and FAIR. One API: lakehouse, lineage, feature store, o…
  ☆199Updated last week
• jejomath / foam
  Foam low-code for coders app development framework
  ☆19Updated last year
• yachielab / QUEEN
  QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources
  ☆45Updated 2 weeks ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆86Updated last week
• aws / amazon-genomics-cli
  ☆147Updated last year
• Nesvilab / philosopher
  PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering
  ☆119Updated last month
• churchmanlab / genewalk
  GeneWalk identifies relevant gene functions for a biological context using network representation learning
  ☆132Updated last year
• levitsky / pyteomics
  Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…
  ☆141Updated 2 weeks ago
• ebi-webcomponents / nightingale
  Data visualisation web components for the life sciences.
  ☆137Updated 2 weeks ago
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆96Updated last month
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆52Updated 3 weeks ago
• openvax / mhcflurry
  Peptide-MHC I binding affinity prediction
  ☆218Updated 5 months ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆35Updated 4 months ago
• jessegmeyerlab / proteomics-tutorial
  ☆66Updated last year
• Study-Tracker / Study-Tracker
  Study management software for research organizations.
  ☆26Updated last week
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆108Updated 5 years ago
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆98Updated last year
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆48Updated last week
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆286Updated 4 months ago
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆56Updated last year
• Roestlab / PythonProteomics
  A collection of available Python tools for Proteomics analysis
  ☆61Updated 6 years ago