Alternatives and similar repositories for omicsplayground

Users that are interested in omicsplayground are comparing it to the libraries listed below

• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆79Updated last month
• svalvaro / drawCell
  R package to create cell pictures.
  ☆134Updated 3 years ago
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆196Updated 2 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 6 months ago
• iSEE / iSEE
  R/shiny interface for interactive visualization of data in SummarizedExperiment objects
  ☆228Updated this week
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆63Updated 2 months ago
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆68Updated 2 weeks ago
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆88Updated 5 years ago
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆94Updated 3 weeks ago
• CRI-iAtlas / shiny-iatlas
  An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
  ☆49Updated 4 years ago
• ropensci / UCSCXenaTools
  An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…
  ☆111Updated last month
• Bioconductor / BiocStickers
  Stickers for some Bioconductor packages - feel free to contribute and/or modify.
  ☆136Updated last month
• hhhh5 / ewastools
  A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)
  ☆26Updated 3 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 5 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆54Updated 7 months ago
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆159Updated last week
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆83Updated 3 months ago
• lazappi / clustree
  Visualise Clusterings at Different Resolutions
  ☆241Updated 4 months ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆39Updated 5 years ago
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆67Updated this week
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated this week
• jokergoo / InteractiveComplexHeatmap
  Make Interactive Complex Heatmaps
  ☆138Updated last year
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆38Updated 3 weeks ago
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆31Updated 2 years ago
• YuLab-SMU / ggbreak
  An implementation of scale functions for setting axis breaks of a 'gg' plot.
  ☆141Updated 2 months ago
• neurogenomics / rworkflows
  Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.
  ☆81Updated 2 months ago
• nvelden / NGLVieweR
  Visualize and interact with Protein Data Bank (pdb) and structural files in R and Shiny
  ☆54Updated 11 months ago
• stephaniehicks / bioconductorNotes
  My notes/usage examples for various Bioconductor packages
  ☆15Updated 8 years ago
• tidyomics / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆174Updated last week
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆148Updated last week