lasigeBioTM / BOLSTMLinks
Classifying Relations via Long Short-Term Memory Networks along Biomedical Ontologies
☆15Updated 2 years ago
Alternatives and similar repositories for BOLSTM
Users that are interested in BOLSTM are comparing it to the libraries listed below
Sorting:
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆136Updated last year
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- Unsupervised domain adaptation method for relation extraction☆18Updated 7 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Full abstract relation extraction from biological texts with bi-affine relation attention networks☆131Updated 6 years ago
- This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.☆11Updated 6 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- ☆48Updated last year
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Relation Extraction with Semeval 2010 data, i2b2 2010 VA challenge classification data and DDI extraction data.☆19Updated 6 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- ☆35Updated 4 years ago
- ☆122Updated 7 years ago
- Turku Event Extraction System☆146Updated 6 years ago
- Entity And RELation mapping☆101Updated 5 months ago
- neural joint model for entity and relation extraction☆26Updated 8 years ago
- [AKBC 19] Improving Relation Extraction by Pre-trained Language Representations☆107Updated 3 years ago
- ☆230Updated 7 years ago
- A CRF-biLSTM based Biomedical NER model in Bioinformatics 2018.☆24Updated 7 years ago
- Implementation of TACL 2017 paper: Cross-Sentence N-ary Relation Extraction with Graph LSTMs. Nanyun Peng, Hoifung Poon, Chris Quirk, Kri…☆61Updated 6 years ago
- Code regarding to our paper "N-ary Relation Extraction using Graph State LSTM"☆94Updated 5 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- named entity linking with latent relations☆172Updated 3 years ago
- Code for the paper "Fine-Grained Entity Typing in Hyperbolic Space"☆38Updated 5 years ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 5 years ago
- Python wrapper for OpenIE5☆39Updated 5 years ago