JungeAlexander / cocoscore
CoCoScore: context-aware co-occurrence scores for text mining applications
☆18Updated 5 years ago
Alternatives and similar repositories for cocoscore:
Users that are interested in cocoscore are comparing it to the libraries listed below
- Retrieve and process PubTator annotations☆44Updated last year
- ☆22Updated 2 years ago
- A framework for keeping biomedical text mining result up-to-date☆42Updated 4 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- ☆41Updated 5 years ago
- Data structures and code to read/write BioC XML and Json.☆31Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆43Updated 4 months ago
- A Standard Database for Drug Repositioning☆18Updated 7 years ago
- a module to calculate the MeSH similarity☆26Updated 3 years ago
- ☆52Updated 4 years ago
- ☆20Updated 4 months ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- ☆24Updated 4 years ago
- Biomedical wordlists (of drugs, genes, etc) for several text mining projects☆18Updated last year
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 3 years ago
- Literature mining for T cell relations☆23Updated 2 years ago
- Python library for working with BioC files☆13Updated 6 years ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆14Updated 3 years ago
- PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as i…☆25Updated 6 years ago
- ☆65Updated 2 years ago
- Text annotation tool for team collaboration☆40Updated last year
- Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer☆41Updated 2 years ago
- ☆12Updated 4 years ago
- Target prioritization using network representation learning☆11Updated 3 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆28Updated 3 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 7 years ago
- Python library for work with BioCreative files☆13Updated 6 years ago