Layne-Huang / EGFI
EGFI: Drug-Drug Interaction Extraction and Generation with Fusion of Enriched Entity and Sentence Information
☆20Updated last year
Alternatives and similar repositories for EGFI:
Users that are interested in EGFI are comparing it to the libraries listed below
- ☆28Updated last year
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆18Updated 2 years ago
- This repository includes the source-code and dataset used in our CIKM2022 paper titled 'Commonsense Knowledge Base Completion with Relati…☆30Updated 2 years ago
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆35Updated 3 years ago
- Collective Multi-type Entity Alignment Between Knowledge Graphs (WWW'20)☆32Updated 4 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆84Updated 6 months ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆29Updated 4 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- code for the paper 'Multi-Task Learning for Knowledge Graph Completion with Pre-trained Language Models' (COLING20).☆26Updated 7 months ago
- Using pretrained language models for biomedical knowledge graph completion.☆46Updated 3 years ago
- ☆20Updated 2 years ago
- A Capsule Network-based Model for Learning Node Embeddings (CIKM 2020)☆24Updated 4 years ago
- ☆17Updated 2 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆27Updated 2 years ago
- Source code for "A Deep-learning System Bridging Molecule Structure and Biomedical Text with Comprehension Comparable to Human Profession…☆84Updated last year
- ☆24Updated 3 years ago
- ☆9Updated 2 years ago
- Improving Inductive Link Prediction Using Hyper-Relational Facts☆13Updated 2 years ago
- Generative Adversarial Zero-Shot Relational Learning for Knowledge Graphs☆48Updated 3 years ago
- Keras implementation of path-based link prediction model for knowledge graph completion☆24Updated 2 years ago
- CPI Extraction☆9Updated 2 years ago
- ☆10Updated 2 years ago
- [Paper][WWW2023] Structure Pre-training and Prompt Tuning for Knowledge Graph Transfer☆48Updated last year
- Codes for SHINE published in EMNLP 2021.☆36Updated 2 years ago
- A tool to help understand how GNN/BERT works by attention☆15Updated 4 years ago
- ☆20Updated 2 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆33Updated last year
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆90Updated 5 years ago
- ChronoKGE - A knowledge graph embedding framework for time-focused representation learning (RepL4NLP @ ACL 2022)☆12Updated 2 years ago
- drugbank相关数据的处理,包括获取药物sdf结构文件,drug相关信息,drug作用相关蛋白信息,drugbank中drug id与其他数据库的映射,protein蛋白相关信息到其他数据库的映射☆18Updated 3 years ago