This repository aims to track the progress in BioNER and give a related paper list and an overview of the state-of-the-art (SOTA).
☆201Feb 23, 2021Updated 5 years ago
Alternatives and similar repositories for BioNER-Progress
Users that are interested in BioNER-Progress are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆136Jul 25, 2024Updated 2 years ago
- ☆237Aug 15, 2017Updated 9 years ago
- Att-ChemdNER☆111Jul 17, 2018Updated 8 years ago
- ☆48Aug 30, 2023Updated 3 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Feb 5, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆2,215Aug 13, 2023Updated 3 years ago
- NCBI disease corpus - related resources☆31May 10, 2017Updated 9 years ago
- Learning Named Entity Tagger from Domain-Specific Dictionary☆485Oct 5, 2019Updated 7 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Apr 18, 2022Updated 4 years ago
- ☆29Feb 23, 2026Updated 8 months ago
- Noise Reduction Methods for Distantly Supervised Biomedical Relation Extraction☆11Oct 25, 2017Updated 9 years ago
- Medical Named Entity Recognition implement using bi-directional lstm and crf model with char embedding.CCKS2017中文电子病例命名实体识别项目,主要实现使用了基于字…☆441Apr 1, 2022Updated 4 years ago
- 中文医学NLP公开资源整理：术语集/语料库/词向量/预训练模型/知识图谱/命名实体识别/QA/信息抽取/模型/论文/etc☆2,656Jan 17, 2024Updated 2 years ago
- PyTorch Implementation of BioBERT☆351Jun 24, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 中药说明书实体识别挑战☆11Nov 3, 2020Updated 6 years ago
- Conversion from brat-flavored standoff to CoNLL format☆73Nov 26, 2020Updated 5 years ago
- ☆50May 29, 2022Updated 4 years ago
- Chinese NER using Lattice LSTM. Code for ACL 2018 paper.☆1,832Apr 25, 2019Updated 7 years ago
- DeepIE: Deep Learning for Information Extraction☆1,928Dec 9, 2022Updated 3 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Jan 12, 2022Updated 4 years ago
- Python library for working with BioC files☆13Mar 28, 2018Updated 8 years ago
- [CBLUE1] 中文医疗信息处理基准CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark☆859May 3, 2023Updated 3 years ago
- CCKS2019中文命名实体识别任务。从医疗文本中识别疾病和诊断、解剖部位、影像检查、实验室检验、手术和药物6种命名实体。现已实现基于jieba和AC自动机的baseline构建、基于BiLSTM和CRF的序列标住模型构建。bert的部分代码主要源于https://gith…☆351Oct 9, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Lexicon-based Named Entity Recognition☆157Jul 26, 2022Updated 4 years ago
- UMLs（一体化医学语言系统）介绍☆44Mar 8, 2018Updated 8 years ago
- ☆38Jun 26, 2023Updated 3 years ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆710Jun 2, 2020Updated 6 years ago
- Hierarchically-Refined Label Attention Network for Sequence Labeling☆291Apr 9, 2021Updated 5 years ago
- 中文生物医学自然语言处理（Chinese-BioNLP）☆163Jan 30, 2021Updated 5 years ago
- Source Code for ACL 2020 paper, "Rationalizing Medical Relation Prediction from Corpus-level Statistics"☆11Sep 6, 2020Updated 6 years ago
- MIC-CIS entry in PharmaCoNER, Bacteria Biotope (BB 2029) & SeeDev 2019 Shared Tasks in EMNLP '19☆11Feb 22, 2020Updated 6 years ago
- Implementation of TACL 2017 paper: Cross-Sentence N-ary Relation Extraction with Graph LSTMs. Nanyun Peng, Hoifung Poon, Chris Quirk, Kri…☆61Nov 29, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- 瑞金医院MMC人工智能辅助构建知识图谱大赛TOP40解决方案☆19Jan 17, 2019Updated 7 years ago
- Code for EMNLP 2019 paper "A Boundary-aware Neural Model for Nested Named Entity Recognition"☆89Jan 24, 2022Updated 4 years ago
- ☆12Mar 12, 2021Updated 5 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Mar 5, 2019Updated 7 years ago
- Large-scale Exploration of Neural Relation Classification Architectures☆11Nov 15, 2018Updated 7 years ago
- ccks baidu entity link 实体链接 第一名☆839Dec 19, 2023Updated 2 years ago
- Reject complicated operations for incorporating lexicon for Chinese NER.☆437Jan 22, 2022Updated 4 years ago