yueyu1030 / SumGNNLinks
[Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'.
☆86Updated last year
Alternatives and similar repositories for SumGNN
Users that are interested in SumGNN are comparing it to the libraries listed below
Sorting:
- ☆57Updated 4 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated last month
- A Knowledge Graph for Relational Learning On Biological Data☆102Updated last year
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆89Updated 4 years ago
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆40Updated 4 years ago
- Code and Data for the paper: Molecular Contrastive Learning with Chemical Element Knowledge Graph [AAAI 2022]☆91Updated last year
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 4 years ago
- Multi-view Graph Contrastive Representation Learning for Drug-drug Interaction Prediction☆44Updated 3 years ago
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆94Updated 5 years ago
- ☆77Updated last year
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆152Updated last year
- ☆34Updated 4 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 3 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆28Updated 2 years ago
- Source code for TKDE'22 "KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction"☆28Updated 3 years ago
- ☆26Updated last year
- ☆24Updated 3 years ago
- TIP: Tri-graph Interaction Propagation model for Polypharmacy Side Effect Prediction (GRL@NeurIPS, 2019)☆24Updated 2 years ago
- ☆29Updated last year
- DeepDrug: A general graph-based deep learning framework for drug relation prediction☆60Updated 3 years ago
- Drug-Target Interaction Prediction with GraphAttention networks☆18Updated 5 years ago
- ☆18Updated 2 years ago
- Python package is for paper 'Predicting potential drug-drug interactions by integrating chemical, biological, phenotypic and network data…☆37Updated 8 years ago
- Source code for "A Deep-learning System Bridging Molecule Structure and Biomedical Text with Comprehension Comparable to Human Profession…☆89Updated last year
- NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions☆76Updated 4 years ago
- [ACL 2023 Oral] Clinical Note Owns its Hierarchy: Multi-Level Hypergraph Neural Networks for Patient-Level Representation Learning☆9Updated last year
- related to graph and deep Learning for drug-drug interactions prediction.☆28Updated 2 years ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆233Updated 2 months ago
- [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding☆149Updated 5 months ago