shigerushinomoto / CoNNECTLinks
CoNNECT: Convolutional Neural Network for Estimating synaptic Connectivity from spike Trains. Endo et al., bioRxiv (2020).
☆10Updated 2 years ago
Alternatives and similar repositories for CoNNECT
Users that are interested in CoNNECT are comparing it to the libraries listed below
Sorting:
- Tools for identifying sharp wave ripple events using LFPs☆37Updated 7 months ago
- GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)☆35Updated 2 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆31Updated last month
- ☆14Updated last year
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 7 years ago
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆17Updated this week
- ☆52Updated 2 years ago
- ☆18Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆52Updated 3 months ago
- ☆14Updated 2 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆48Updated last year
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆63Updated last week
- Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors☆28Updated 3 months ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆40Updated 5 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆74Updated last month
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated 3 weeks ago
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆19Updated last week
- Visualization of electrophysiological data from Elephant☆24Updated 7 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆70Updated 5 years ago
- Mesoscale activity ephys ingest schema☆11Updated last year
- A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…☆16Updated 2 months ago
- Python code implementing the ZETA-test☆27Updated 2 months ago
- WIP: Python port of Kilosort2☆51Updated last year
- Code to train low-rank RNNs on cognitive tasks & reproduce experiments from populations paper☆28Updated 2 months ago
- jPCA for Neural Data Analysis in Python☆50Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆60Updated 2 weeks ago