shigerushinomoto / CoNNECT
CoNNECT: Convolutional Neural Network for Estimating synaptic Connectivity from spike Trains. Endo et al., bioRxiv (2020).
☆10Updated 2 years ago
Alternatives and similar repositories for CoNNECT:
Users that are interested in CoNNECT are comparing it to the libraries listed below
- Tools for identifying sharp wave ripple events using LFPs☆36Updated 4 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆52Updated 3 weeks ago
- ☆49Updated 2 years ago
- GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)☆34Updated 2 years ago
- ☆14Updated last week
- ☆15Updated 9 months ago
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆17Updated this week
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆68Updated 4 years ago
- Plugins for Phy2☆16Updated last month
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆28Updated 2 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆45Updated 4 months ago
- ☆14Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆42Updated last year
- Tutorial☆10Updated 4 years ago
- Mesoscale activity ephys ingest schema☆11Updated last year
- jPCA for Neural Data Analysis in Python☆46Updated last year
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆44Updated 5 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆57Updated last week
- pynapple collaborative data analysis (high level python scripts)☆37Updated 10 months ago
- Sparse component analysis☆27Updated last week
- WIP: Python port of Kilosort2☆50Updated last year
- methods for detecting/quantifying reactivation and replay in neural data☆11Updated 3 years ago
- CNN-ripple is a 1D convolutional neural network (CNN) operating over high-density LFP recordings to detect hippocampal SWR both offline a…☆16Updated 2 years ago
- Functions to assess quality of spike sorting results☆32Updated last year
- ☆21Updated this week
- Neuropixels case for chronic recordings in freely moving mice.☆16Updated 5 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 5 months ago