Analysis for spatially modulated spiking activity, e.g. place cells, grid cells
☆22Feb 17, 2026Updated 5 months ago
Alternatives and similar repositories for spatial-maps
Users that are interested in spatial-maps are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for Functional Mixed Models for Fiber Photometry☆19Jul 30, 2025Updated 11 months ago
- Tutorial☆11Jan 25, 2021Updated 5 years ago
- The code and trajectory data for the continuous attractor network model of grid cells and place cells for my senior honors thesis in Cogn…☆11Nov 20, 2020Updated 5 years ago
- Learning Grid Cells as Vector Representation of Self-Position Coupled with Matrix Representation of Self-Motion☆18Feb 24, 2019Updated 7 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆37Aug 22, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CNN-ripple is a 1D convolutional neural network (CNN) operating over high-density LFP recordings to detect hippocampal SWR both offline a…☆18Nov 15, 2022Updated 3 years ago
- Official code for Conformal Isometry of Lie Group Representation in Recurrent Network of Grid Cells (NeurIPS workshop on Symmetry and Geo…☆13Nov 1, 2022Updated 3 years ago
- Decoding behavior from calcium imaging data☆15Jun 18, 2020Updated 6 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Sep 15, 2023Updated 2 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆35Oct 6, 2023Updated 2 years ago
- Example analyses making extensive use of nelpy.☆10May 1, 2019Updated 7 years ago
- ☆15Updated this week
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Jun 20, 2022Updated 4 years ago
- Tools for identifying sharp wave ripple events using LFPs☆41Jan 22, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- CoNNECT: Convolutional Neural Network for Estimating synaptic Connectivity from spike Trains. Endo et al., bioRxiv (2020).☆14Aug 12, 2022Updated 3 years ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆36Jan 15, 2026Updated 6 months ago
- A multi-species, multi-ephys format histology processing and probe alignment pipeline☆13Mar 20, 2024Updated 2 years ago
- Revealing neural correlates of behavior without behavioral measurements☆18Nov 18, 2019Updated 6 years ago
- A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.☆264Jul 9, 2026Updated last week
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆15Aug 27, 2021Updated 4 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆53Sep 26, 2025Updated 9 months ago
- analysis tools for large-scale neural recordings☆17Apr 4, 2025Updated last year
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆25May 29, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- 2019-20 unit material for Information Processing and the Brain☆19Sep 2, 2020Updated 5 years ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆75Jul 13, 2026Updated last week
- Dimensionality reduction of calcium-imaged neuronal population activity☆16Feb 1, 2023Updated 3 years ago
- vandermeerlab code base☆17Sep 19, 2025Updated 10 months ago
- Open Neurophysiology Environment☆23Apr 9, 2026Updated 3 months ago
- Closed-Loop, Electrophysiology, and Optophysiology experiment simulation testbed for mesoscale neuroscience☆23Updated this week
- A lock in amplifier running on the RedPitaya's FPGA☆18Jan 29, 2019Updated 7 years ago
- Kernel Current Source Density☆25Jun 26, 2024Updated 2 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Apr 24, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- "Approaches to Study Neural Circuits" course☆67Dec 13, 2024Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆63Nov 26, 2023Updated 2 years ago
- Analysis of hippocampal activity in the towers task☆24Apr 29, 2021Updated 5 years ago
- Repository for ICE1011, an undergraduate and graduate course on signal analysis for neuroscience☆16Oct 19, 2021Updated 4 years ago
- ☆37Apr 22, 2024Updated 2 years ago
- Analytical methods for efficient inference of integrate-and-fire circuit models from single-trial spike trains☆11Oct 30, 2019Updated 6 years ago
- Tools for analyzing spiking data from single-neuron recodings.☆31Jun 22, 2026Updated 3 weeks ago