Alternatives and similar repositories for decodanda

Users that are interested in decodanda are comparing it to the libraries listed below

• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆72Updated last month
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆53Updated 2 years ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆58Updated 9 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆138Updated 5 months ago
• Eden-Kramer-Lab / ripple_detection
  Tools for identifying sharp wave ripple events using LFPs
  ☆40Updated last month
• pillowlab / GLMspiketraintutorial_python
  ☆60Updated 3 years ago
• spiketools / spiketools
  Tools for analyzing spiking data from single-neuron recodings.
  ☆29Updated last month
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆75Updated 2 weeks ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆52Updated 2 months ago
• nicholas-roy / psytrack
  ☆56Updated 9 months ago
• irisstone / glmhmm
  code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)
  ☆31Updated last year
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 6 years ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆111Updated this week
• anoushkajain / UnitRefine
  UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.
  ☆62Updated this week
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆32Updated 3 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated 2 years ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆120Updated 3 weeks ago
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆68Updated 2 years ago
• glaserlab / sca
  Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors
  ☆29Updated 9 months ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆28Updated this week
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆71Updated this week
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 11 months ago
• PeyracheLab / StarterPack
  Tutorial
  ☆11Updated 4 years ago
• buzsakilab / 3d_print_designs
  ☆18Updated last year
• NeuroNetMem / PowerPixelsPipeline
  ☆23Updated 3 weeks ago
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆56Updated last week
• open-ephys / analysis-tools
  Archived code for reading data saved by the Open Ephys GUI
  ☆60Updated 2 years ago
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆131Updated 2 years ago
• murthylab / GLMHMM
  ☆24Updated 5 years ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆85Updated last year