XiaohuaZhangLLNL / VinaLCLinks
A parallel molecular docking program based on AutoDock Vina
☆19Updated 2 months ago
Alternatives and similar repositories for VinaLC
Users that are interested in VinaLC are comparing it to the libraries listed below
Sorting:
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Updated 7 years ago
- An MPI based parallel implementation of Autodock Vina☆16Updated 5 years ago
- PyMOL Plugin for displaying polar contacts☆18Updated 6 years ago
- Machine learning model for predicting Human Oral Bioavailability☆14Updated 3 years ago
- Parallelized Open Babel & Autodock suite Pipeline☆24Updated 7 years ago
- PCA and normal mode analysis of proteins☆19Updated last year
- Python script that creates 2D protein-ligand interaction images☆14Updated 7 years ago
- Ligand binding site prediction and virtual screening☆12Updated 7 years ago
- pKAI: a fast and interpretable deep learning approach to accurate electrostatics-driven pKa prediction☆30Updated 4 years ago
- Protein-Ligand Interaction Fingerprints☆21Updated 4 years ago
- Python code to automatically interact with PDBePISA web server☆10Updated 3 years ago
- Tool for mining structure-property relationships from chemical datasets☆16Updated last month
- Cloud-based Drug Binding Structure Prediction☆44Updated 3 weeks ago
- protein docking using a density-based descriptor for atoms charge and dynamics☆14Updated 3 years ago
- Subpocket-based fingerprint for kinase pocket comparison☆33Updated 2 years ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 6 months ago
- ☆10Updated 4 years ago
- ☆10Updated 6 years ago
- Protocols and tools to run (automated) atomistic simulations of enzyme-ligand systems☆21Updated 4 years ago
- A Python toolkit to compute molecular features and predict activities and properties of small molecules☆21Updated 3 years ago
- WaterDock-2.0 implementation with Akshay Sridhar☆21Updated 2 years ago
- A repo for analysis of ensembles of protein-ligand complexes☆30Updated 10 months ago
- ☆14Updated 3 years ago
- GaudiMM: A modular optimization platform for molecular design☆32Updated last year
- MD pharmacophores and virtual screening☆34Updated last year
- Code available for the quantitative pharmacophores☆12Updated 3 years ago
- Open Drug Metabolism & PharmacoKinetics (OpenDMPK) is an open source data resource and toolkit for predicting drug metabolism and pharmac…☆26Updated 3 years ago
- Tools to calculate descriptors from molecular dynamics and it's application to predict drug resistance.☆15Updated 2 years ago
- Collection of scripts / notebooks to reliably select datasets☆29Updated last year
- ChEMBL Similarity Search☆17Updated 5 years ago