A deep learning framework (CreoPep) for target-specific design and optimization of conotoxin peptides
☆17Mar 28, 2026Updated 7 months ago
Alternatives and similar repositories for CreoPep
Users that are interested in CreoPep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicting cleaved peptides in protein sequences☆11Jul 3, 2024Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆56May 2, 2022Updated 4 years ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆13Feb 16, 2020Updated 6 years ago
- ☆39Aug 28, 2023Updated 3 years ago
- ☆14Sep 27, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆61Nov 26, 2024Updated last year
- ☆16Oct 16, 2025Updated last year
- Features Based Conformational Clustering of MD trajectories. See details at:☆11Aug 1, 2026Updated 2 months ago
- A fine-tuned version of ProteinMPNN for generating stable cyclic peptide sequences☆52Jun 30, 2026Updated 4 months ago
- ☆19Jun 14, 2026Updated 4 months ago
- ☆14Jul 12, 2021Updated 5 years ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆113May 25, 2025Updated last year
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 7 months ago
- Heuristic energy-based cyclic peptide design☆17Feb 21, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆47Sep 16, 2024Updated 2 years ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆18Jul 9, 2024Updated 2 years ago
- ☆261Sep 22, 2026Updated last month
- Protocol to redesign enzyme sequences for stability and expression followed in Krasnow et. al. 2025 (). Developed using ProteinMPNN (Daup…☆21May 11, 2026Updated 5 months ago
- ☆19Mar 19, 2026Updated 7 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆141Oct 30, 2025Updated last year
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆281Jul 24, 2025Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- Tutorial files☆12Aug 7, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆18Mar 13, 2024Updated 2 years ago
- ☆94Jan 23, 2026Updated 9 months ago
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆33Aug 6, 2025Updated last year
- Peptide2Mol: A Diffusion Model for Generating Small Molecules as Peptide Mimics for Targeted Protein Binding☆20Jul 7, 2026Updated 3 months ago
- Nano Prot GPT: NanoGPT on protein sequences☆20Mar 10, 2023Updated 3 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆74Aug 29, 2025Updated last year
- ☆140Jul 12, 2024Updated 2 years ago
- In silico directed evolution of peptide binders with AlphaFold☆282Sep 25, 2026Updated last month
- ☆16Jun 11, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆420Aug 7, 2024Updated 2 years ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆18Aug 1, 2026Updated 2 months ago
- Independent evaluation set construction for trustworthy ML models in biochemistry☆15Aug 24, 2026Updated 2 months ago
- Multi-target protein binder design for specificity and cross-reactivity.☆20Sep 10, 2026Updated last month
- Affinity Protein-Protein Transformers—State of the art protein-protein binding affinity in seconds!☆110Feb 18, 2025Updated last year
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 4 years ago
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆22Oct 22, 2026Updated last week