A DIY Guide To Single-Cell RNA-Sequencing Analysis
☆37Apr 8, 2025Updated last year
Alternatives and similar repositories for scRNA-seq-guide
Users that are interested in scRNA-seq-guide are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆21Feb 23, 2025Updated last year
- Assorted ML tutorials that I originally wrote for Decoding Biology☆15Aug 18, 2024Updated 2 years ago
- PhysioNexus is a open source tool that transforms complex time series data into intuitive network visualizations showing cause-and-effect…☆19Jun 24, 2025Updated last year
- A DIY guide to gene co-expression network analysis☆17Mar 31, 2025Updated last year
- R Fundamentals for Biologists☆35Jan 25, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Introduction to Bash for bioinformatics☆55Aug 9, 2024Updated 2 years ago
- Assorted functions for performing numerical methods and solving common problems in systems biology☆30Jan 8, 2025Updated last year
- Python Fundamentals for Biologists☆46Nov 15, 2024Updated last year
- A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…☆529Dec 26, 2025Updated 9 months ago
- ☆19Oct 22, 2025Updated 11 months ago
- ☆36Oct 7, 2026Updated last week
- Ressources for Boinformatics Trainings☆15Nov 20, 2023Updated 2 years ago
- RGenEDA package for exploratory data analysis☆17May 15, 2026Updated 4 months ago
- Physalia course Machine Learning for Multi-Omics Integration☆21Jun 11, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach☆27Jan 31, 2025Updated last year
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆98Aug 26, 2024Updated 2 years ago
- Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data☆139Aug 11, 2026Updated 2 months ago
- Different tasks from the field of data science applied on typical bioinformatic data. Mainly used packages are numpy and scipy and the co…☆10May 4, 2019Updated 7 years ago
- Cross-attention-based cell-cell interaction inference from ST data.☆22Sep 25, 2026Updated 2 weeks ago
- ☆24Jan 10, 2025Updated last year
- Convert TCR gene names☆15Dec 26, 2025Updated 9 months ago
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆44Mar 21, 2026Updated 6 months ago
- Run multiple Pipeline5 instances at once☆11Jun 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package: Manifold learning in R☆14Apr 7, 2020Updated 6 years ago
- Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆16Aug 13, 2025Updated last year
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Jan 25, 2024Updated 2 years ago
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆101Oct 5, 2026Updated last week
- ☆14Jul 18, 2025Updated last year
- Nanopore sequencing-based episignature detection☆19Jun 10, 2026Updated 4 months ago
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆17Updated this week
- A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.☆37Updated this week
- Hotspot cluster distance analysis in spatial transcriptomic data☆37Feb 10, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Aug 17, 2023Updated 3 years ago
- Pipeline to predict off-target binding via probe sequences☆16Mar 13, 2026Updated 7 months ago
- code related to Shirvalkar et al. 2023 - Nature Neuroscience☆10May 22, 2023Updated 3 years ago
- RNAseq pipeline for alternative splicing junctions☆15Mar 26, 2026Updated 6 months ago
- De novo genome assembly for long reads using an overlap graph☆25Oct 5, 2026Updated last week
- ☆19Oct 2, 2026Updated last week
- XTensions built using Python 3.7 for Imaris software☆12Apr 24, 2026Updated 5 months ago