Introduction to Bash for bioinformatics
☆54Aug 9, 2024Updated last year
Alternatives and similar repositories for bash_fundamentals
Users that are interested in bash_fundamentals are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R Fundamentals for Biologists☆33Jan 25, 2025Updated last year
- Python Fundamentals for Biologists☆42Nov 15, 2024Updated last year
- Assorted ML tutorials that I originally wrote for Decoding Biology☆14Aug 18, 2024Updated last year
- Assorted functions for performing numerical methods and solving common problems in systems biology☆30Jan 8, 2025Updated last year
- Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq☆11Oct 3, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆20Feb 23, 2025Updated last year
- A DIY Guide To BLAST Tools For Sequence Alignment☆17Aug 9, 2024Updated last year
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆97Aug 26, 2024Updated last year
- PhysioNexus is a open source tool that transforms complex time series data into intuitive network visualizations showing cause-and-effect…☆17Jun 24, 2025Updated last year
- Exploring mutual features between the 5xFAD, 3xTG-AD, and PS3O1S Alzheimer's Disease Mouse Models☆12Jan 10, 2025Updated last year
- A DIY guide to gene co-expression network analysis☆16Mar 31, 2025Updated last year
- A biotechnologist's guide to evaluating machine learning algorithms, with practical Python examples☆22Feb 10, 2025Updated last year
- Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach☆27Jan 31, 2025Updated last year
- Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY …☆30Jan 13, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…☆509Dec 26, 2025Updated 7 months ago
- A DIY Guide To Single-Cell RNA-Sequencing Analysis☆35Apr 8, 2025Updated last year
- A practical guide to modern bioinformatics☆35Jan 30, 2026Updated 5 months ago
- A DIY Guide to Developing Proteomic Biomarker Panels☆31Feb 24, 2026Updated 5 months ago
- My youtube programming scripts☆60Jan 16, 2025Updated last year
- I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python☆30Oct 2, 2025Updated 9 months ago
- Course Data Analysis for Life Sciences based on the material by Rafael Irizarry & Mike Love☆20Jun 3, 2020Updated 6 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆29Jun 1, 2026Updated last month
- RGenEDA package for exploratory data analysis☆17May 15, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Materials and presentation for the 2023 ISB Microbiome course.☆25Sep 25, 2024Updated last year
- ☆14Sep 17, 2021Updated 4 years ago
- AI-Driven Code Generation, Explanation and Execution for Data Analysis☆23Sep 11, 2024Updated last year
- A comprehensive tutorial for proteomics data analysis in R that utilizes packages developed by researchers at PNNL and from Bioconductor.☆11May 28, 2022Updated 4 years ago
- Customer workshop materials☆19May 13, 2026Updated 2 months ago
- Scripts written for the "Finding Hidden Messages in DNA (Bioinformatics I)" course offered by UCSanDiego on Coursera.org☆11Apr 25, 2016Updated 10 years ago
- This repository offers a streamlined RNA-Seq analysis workflow implemented in R, designed to transform raw sequencing data into meaningfu…☆31Dec 15, 2024Updated last year
- instructor notes from Software Carpentry workshops☆10Jan 25, 2019Updated 7 years ago
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆21Jun 12, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆10Sep 11, 2020Updated 5 years ago
- A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets☆31Nov 9, 2025Updated 8 months ago
- Intro to Shell for Bioinformatics - with STG examples☆28Jul 12, 2016Updated 10 years ago
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆16Aug 13, 2025Updated 11 months ago
- Template for building your own portfolio☆27Jul 2, 2025Updated last year
- The Bioinformatician’s Interactive Lab Notebook (BILN) is a smart, dynamic system for tracking experiments, datasets, and workflows. Desi…☆57May 19, 2026Updated 2 months ago