Introduction to Bash for bioinformatics
☆55Aug 9, 2024Updated 2 years ago
Alternatives and similar repositories for bash_fundamentals
Users that are interested in bash_fundamentals are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R Fundamentals for Biologists☆35Jan 25, 2025Updated last year
- Python Fundamentals for Biologists☆47Nov 15, 2024Updated last year
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆21Feb 23, 2025Updated last year
- Exploring mutual features between the 5xFAD, 3xTG-AD, and PS3O1S Alzheimer's Disease Mouse Models☆12Jan 10, 2025Updated last year
- Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq☆11Oct 3, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A DIY Guide To BLAST Tools For Sequence Alignment☆18Aug 9, 2024Updated 2 years ago
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆98Aug 26, 2024Updated 2 years ago
- A DIY guide to gene co-expression network analysis☆17Mar 31, 2025Updated last year
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆30Aug 11, 2024Updated 2 years ago
- PhysioNexus is a open source tool that transforms complex time series data into intuitive network visualizations showing cause-and-effect…☆19Jun 24, 2025Updated last year
- BiophysicsExpert is an educational tool that provides users with a searchable database of over 150 biophysics formulas, allowing them to …☆12Mar 17, 2025Updated last year
- Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY …☆31Jan 13, 2025Updated last year
- Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach☆27Jan 31, 2025Updated last year
- A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…☆535Dec 26, 2025Updated 10 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A biotechnologist's guide to evaluating machine learning algorithms, with practical Python examples☆23Feb 10, 2025Updated last year
- A DIY Guide To Single-Cell RNA-Sequencing Analysis☆37Apr 8, 2025Updated last year
- A practical guide to modern bioinformatics☆35Jul 27, 2026Updated 3 months ago
- ☆10May 13, 2025Updated last year
- A DIY Guide to Developing Proteomic Biomarker Panels☆32Feb 24, 2026Updated 8 months ago
- My youtube programming scripts☆60Jan 16, 2025Updated last year
- I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python☆30Oct 2, 2025Updated last year
- This repo is mainly for beginners to intermediate level ML/Bioiniformatics engineers/students/enthusiasts. It mainly focus on creating a …☆15Dec 28, 2024Updated last year
- The Bioinformatician’s Interactive Lab Notebook (BILN) is a smart, dynamic system for tracking experiments, datasets, and workflows. Desi…☆57Aug 9, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- nf-core/datasync is a system operation pipeline that provides several workflows for handling system operation / automation tasks☆11Oct 26, 2026Updated last week
- Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.☆25Jul 28, 2026Updated 3 months ago
- RGenEDA package for exploratory data analysis☆18Oct 19, 2026Updated 2 weeks ago
- Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning☆65Jun 3, 2026Updated 5 months ago
- POSTRE: Prediction Of STRuctural variant Effects☆31Sep 3, 2026Updated 2 months ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆17Feb 12, 2026Updated 8 months ago
- Python for Genomic Data Science 2015 Coursera from Johns Hopkins University☆18Aug 2, 2015Updated 11 years ago
- Interactive phylogenetic tree viewer/editor☆49Jul 12, 2023Updated 3 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆20Oct 25, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆14Apr 25, 2026Updated 6 months ago
- A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequenc…☆24Aug 13, 2026Updated 2 months ago
- ☆14Sep 17, 2021Updated 5 years ago
- ☆11Jan 22, 2026Updated 9 months ago
- Materials and presentation for the 2023 ISB Microbiome course.☆25Sep 25, 2024Updated 2 years ago
- Instantaneous Metagenome Taxonomic Profiling with MetaKSSD☆27Nov 3, 2025Updated last year
- A comprehensive tutorial for proteomics data analysis in R that utilizes packages developed by researchers at PNNL and from Bioconductor.☆12May 28, 2022Updated 4 years ago