Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY Guide
☆30Jan 13, 2025Updated last year
Alternatives and similar repositories for PPI_Network_Analysis
Users that are interested in PPI_Network_Analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A DIY guide to gene co-expression network analysis☆16Mar 31, 2025Updated last year
- Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq☆11Oct 3, 2024Updated last year
- Exploring mutual features between the 5xFAD, 3xTG-AD, and PS3O1S Alzheimer's Disease Mouse Models☆12Jan 10, 2025Updated last year
- Assorted ML tutorials that I originally wrote for Decoding Biology☆14Aug 18, 2024Updated last year
- PhysioNexus is a open source tool that transforms complex time series data into intuitive network visualizations showing cause-and-effect…☆17Jun 24, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A biotechnologist's guide to evaluating machine learning algorithms, with practical Python examples☆22Feb 10, 2025Updated last year
- A DIY Guide To BLAST Tools For Sequence Alignment☆17Aug 9, 2024Updated last year
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆20Feb 23, 2025Updated last year
- R Fundamentals for Biologists☆33Jan 25, 2025Updated last year
- Python Fundamentals for Biologists☆42Nov 15, 2024Updated last year
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆27Aug 11, 2024Updated last year
- Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach☆27Jan 31, 2025Updated last year
- A DIY Guide To Single-Cell RNA-Sequencing Analysis☆35Apr 8, 2025Updated last year
- A DIY Guide to Developing Proteomic Biomarker Panels☆31Feb 24, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…☆509Dec 26, 2025Updated 6 months ago
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆97Aug 26, 2024Updated last year
- Introduction to Bioinformatics Traning @Medical Ain Shams Research Institute (MASRI) Jan-2025☆13Feb 6, 2025Updated last year
- This repo is mainly for beginners to intermediate level ML/Bioiniformatics engineers/students/enthusiasts. It mainly focus on creating a …☆15Dec 28, 2024Updated last year
- Drug Response Estimation from single-cell Expression Profiles☆13Jan 5, 2024Updated 2 years ago
- ☆10Jun 25, 2021Updated 5 years ago
- Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆16Aug 13, 2025Updated 11 months ago
- A lightweight music player for Android that embeds the famous Streamrip library, with Jarvis at your disposal!☆22Updated this week
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Based on their genomic data types and goals, this course will help learners find educational resources and tools to help them process and…☆16Jul 1, 2026Updated 3 weeks ago
- coding exercise using TCGA immune infiltration data☆46Feb 2, 2024Updated 2 years ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆15Dec 30, 2025Updated 6 months ago
- A networks analysis pipeline for RNASeq time series data☆14Oct 16, 2020Updated 5 years ago
- ☆15Oct 10, 2023Updated 2 years ago
- Robs manual for the computational genomics and bioinformatics class.☆271Nov 12, 2024Updated last year
- ☆18Jun 22, 2025Updated last year
- ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.☆18Jul 30, 2025Updated 11 months ago
- code related to Shirvalkar et al. 2023 - Nature Neuroscience☆10May 22, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆28Jan 9, 2024Updated 2 years ago
- A Deep Learning Framework for Allosteric Site Prediction☆17May 21, 2025Updated last year
- A Quarto blog for Bioconductor community☆17Jun 19, 2026Updated last month
- Repository of tutorials for The COBRA Toolbox☆25Apr 27, 2026Updated 2 months ago
- Official github for "Drug-likeness scoring based on unsupervised learning" (Chemical Science)☆24Sep 1, 2025Updated 10 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Feb 17, 2026Updated 5 months ago
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago