evanpeikon / co_expression_networkLinks
A DIY guide to gene co-expression network analysis
☆13Updated 9 months ago
Alternatives and similar repositories for co_expression_network
Users that are interested in co_expression_network are comparing it to the libraries listed below
Sorting:
- Step-by-step analysis pipeline for RNA-seq data☆161Updated 2 years ago
- Introduction to Bash for bioinformatics☆50Updated last year
- ☆13Updated 7 months ago
- ☆212Updated 5 months ago
- Introduction to bulk RNA-seq☆134Updated 8 months ago
- Tool for plotting sequencing data along genomic coordinates.☆335Updated last month
- 🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.☆201Updated 5 years ago
- ATAC-seq peak-calling and QC analysis pipeline☆221Updated last month
- ☆102Updated 3 months ago
- Nextflow training material☆209Updated this week
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆223Updated this week
- Python Fundamentals for Biologists☆39Updated last year
- Download FASTQ files from SRA or ENA repositories.☆363Updated last week
- ☆286Updated 2 months ago
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆117Updated 5 years ago
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆251Updated this week
- Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair☆185Updated last week
- Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.☆232Updated last month
- Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline☆43Updated 2 years ago
- Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream …☆106Updated last month
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆237Updated last month
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆275Updated 2 months ago
- Discovering known and novel miRNAs from small RNA sequencing data☆158Updated last month
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆229Updated last month
- coding exercise using TCGA immune infiltration data☆46Updated last year
- This repository offers a streamlined RNA-Seq analysis workflow implemented in R, designed to transform raw sequencing data into meaningfu…☆29Updated last year
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆174Updated 4 years ago
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆95Updated last year
- A short tutorial on how to use RSEM☆139Updated 5 years ago
- Generate IGV style locus tracks from bigWig files in R☆175Updated last year