Alternatives and similar repositories for DataAnalysis4LifeSciencesHD

Users that are interested in DataAnalysis4LifeSciencesHD are comparing it to the libraries listed below

• interactivereport / RNASequest
  ☆18Updated last month
• dlaperriere / GEO_microarrays
  analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…
  ☆11Updated 4 years ago
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆24Updated 3 months ago
• allielarocco / Microarray-Analysis
  Microarray Analysis Pipeline in Python
  ☆19Updated 6 years ago
• ucscXena / xenaPython
  Python API for Xena Hub
  ☆53Updated 2 years ago
• Novartis / DRUG-seq
  DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
  ☆33Updated 7 months ago
• davidnboone / tcga_brca_rnaseq
  jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data
  ☆33Updated 6 years ago
• scverse / muon-tutorials
  Tutorials for multimodal omics data analysis
  ☆17Updated 8 months ago
• sysbio-curie / Neko
  This page hosts NeKo, a python package that allow the user to automatically build gene regulatory networks from any databases.
  ☆16Updated last month
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated 2 years ago
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆36Updated 3 years ago
• interactivereport / xOmicsShiny
  xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …
  ☆34Updated 3 weeks ago
• BIRSBiointegration / Hackathon
  Multi-omics studies are available here
  ☆52Updated 3 years ago
• ToolsVanBox / PTATO
  PTa Analysis TOolkit
  ☆14Updated last month
• DeplanckeLab / ASAP
  ASAP : Automated Single-cell Analysis Pipeline
  ☆27Updated 5 months ago
• PathwayAndDataAnalysis / causalpath
  A project for exploring differentially active signaling paths related to proteomics datasets
  ☆44Updated 3 months ago
• LukszaLab / NeoantigenEditing
  ☆20Updated 3 years ago
• BIMSBbioinfo / VoltRon
  Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration
  ☆110Updated last week
• lkmklsmn / insct
  scRNAseq integration with triplet neural networks
  ☆41Updated 2 years ago
• kendomaniac / rCASC
  rCASC: reproducible Classification Analysis of Single Cell Sequencing Data
  ☆14Updated 6 months ago
• nf-core / scflow
  Please consider using/contributing to https://github.com/nf-core/scdownstream
  ☆26Updated last year
• SofieVG / FlowSOM
  Using self-organizing maps for visualization and interpretation of cytometry data
  ☆65Updated last year
• MaayanLab / biojupies-plugins
  User-submitted RNA-seq data analysis tools for BioJupies.
  ☆20Updated 3 months ago
• DanHanh / scLinear
  ☆19Updated last year
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆71Updated 2 years ago
• TaylorResearchLab / scedar
  Single-cell exploratory data analysis for RNA-Seq
  ☆40Updated 4 years ago
• epaull / TieDIE
  Tied Diffusion for Subnetwork Discovery (TieDIE)
  ☆37Updated 3 years ago
• Center-for-Health-Data-Science / multiDGD
  ☆26Updated 5 months ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆62Updated 3 weeks ago
• schultzelab / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆21Updated 6 years ago