physimals / quantiphyse
Application for analysis and modelling of volumetric medical imaging data
☆27Updated 9 months ago
Alternatives and similar repositories for quantiphyse:
Users that are interested in quantiphyse are comparing it to the libraries listed below
- ☆27Updated 2 years ago
- Python module for processing dynamic contrast enhanced magnetic resonance imaging (DCE-MRI) data☆28Updated 2 years ago
- Dynamic Susceptibility Contrast MRI toolbox - AIF selection, deconvolution and leakage correction☆13Updated 2 years ago
- High-throughput Python platform for image reconstruction and analysis☆44Updated 2 months ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆28Updated 3 years ago
- Very fast greedy diffeomorphic registration code☆69Updated last week
- ☆14Updated 4 months ago
- Just when I thought you couldn’t possibly be any dumber, you go and do something like this… and totally redeem yourself!☆22Updated last week
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆36Updated 4 months ago
- MIRTK based SVR reconstruction☆50Updated 3 months ago
- This is a tool to quickly preview nifti images on the terminal☆54Updated 2 weeks ago
- Simulate realistic diffusion-weighted MR data☆19Updated last year
- Software to create perfusion maps from perfusion CT (PCT) acquisitions or flat detector perfusion CT (FDPCT) acquisitions.☆9Updated last year
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆34Updated 3 years ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 6 years ago
- Neuroimaging in PyTorch☆90Updated 2 months ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆51Updated last month
- A project to provide custom sorting and renaming of dicom files☆76Updated 7 months ago
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆16Updated 4 months ago
- Pial Neural Network☆19Updated 3 years ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆36Updated 4 months ago
- Python utilities for medical image and surface-based analysis☆29Updated 2 months ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆15Updated 6 months ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆80Updated 2 years ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated 11 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated this week
- Multi-site dMRI harmonization☆46Updated last month
- Automated deep-learning based brain tumor segmentation on MRI☆27Updated 2 years ago
- DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials☆25Updated last year