Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.
☆23May 19, 2025Updated last year
Alternatives and similar repositories for nilabels
Users that are interested in nilabels are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Dec 31, 2023Updated 2 years ago
- An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (C…☆40Mar 21, 2026Updated 2 months ago
- ☆17Dec 4, 2015Updated 10 years ago
- Neuropycon package of functions for electrophysiology analysis, can be used from ephypype and nipype☆21Oct 2, 2025Updated 8 months ago
- An exploration of how to use inter-subject representational similarity analysis (is-RSA) to study individual differences in brain activit…☆20Apr 22, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MOVED TO https://github.com/nipreps/dmriprep☆17Dec 26, 2022Updated 3 years ago
- ☆31Mar 8, 2022Updated 4 years ago
- xDF estimates variance of Pearson's correlations among highly autocorrelated time series.☆14Oct 5, 2023Updated 2 years ago
- Convert biological neuronal networks to artificial recurrent neuronal networks☆21Jun 22, 2022Updated 3 years ago
- Automated Preprocessing Pipeline for Fetal Resting-State fMRI Data☆16Mar 24, 2023Updated 3 years ago
- A grid sampler for larger-than-memory N-dimensional images☆28Nov 11, 2025Updated 7 months ago
- Dictionary of Functional Modes for brain imaging☆26Feb 1, 2021Updated 5 years ago
- ☆15Aug 3, 2021Updated 4 years ago
- Code for COVID19 CT labeling. Submillimetric CT dataset provided as well.☆13Feb 16, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Submission for MICCAI HACKATHON: https://miccai-hackathon.com/#participate☆15Jul 19, 2023Updated 2 years ago
- a python module to download Broad Bioimage Benchmark Collection images☆24Mar 15, 2019Updated 7 years ago
- fused re-parameterisation, inverted bottleneck and partial spatial convolutions☆10Jul 12, 2023Updated 2 years ago
- Functional alignment and template estimation library for functional Magnetic Resonance Imaging data☆35May 7, 2026Updated last month
- Group analysis demo with NeuroPycon☆12Apr 10, 2020Updated 6 years ago
- MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:☆54Apr 26, 2019Updated 7 years ago
- ☆21Mar 3, 2023Updated 3 years ago
- GitHub pages for mne-tools☆14Updated this week
- Centralized registry of Jitsi rooms and pdfs for OHBM 2020 posters.☆32Jun 25, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is an alpha version of the Max-tree toolbox.☆13Aug 19, 2020Updated 5 years ago
- Pytorch solution for predictions on X-ray images of COVID-19 patients☆10Apr 15, 2020Updated 6 years ago
- DataLad extension for neuroimaging research☆19Mar 10, 2026Updated 3 months ago
- Python application to calculate internal dosimetry following MIRD formulation☆15Jun 3, 2024Updated 2 years ago
- Real-time meshing the contours of 3D scalar fields with the dual contouring algorithm in plain C++ and OpenGL/CUDA. Along with seam handl…☆18May 10, 2026Updated last month
- MICCAI 2017 Paper - Optimal Transport for Diffeomorphic Registration☆56Apr 15, 2019Updated 7 years ago
- Automated anatomical brain label/shape analysis software (+ website)☆154Apr 8, 2021Updated 5 years ago
- A production quality data pipeline for DICOM images segmentation.☆12Feb 4, 2018Updated 8 years ago
- Create directory tree with attachments from Zotero☆11Jun 19, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Neuroimaging widgets for jupyter notebooks☆86Dec 8, 2022Updated 3 years ago
- ☆10Sep 3, 2019Updated 6 years ago
- Self-Tuning Optimized Kalman Filtering (STOK) + DyNet simulation + connectivity metrics☆12Apr 17, 2022Updated 4 years ago
- ☆13Oct 10, 2019Updated 6 years ago
- Beginner's guide for Nipype☆37Feb 7, 2023Updated 3 years ago
- Implementation of the iPiano algorithm for non-convex and non-smooth optimization as described in [1].☆12Nov 28, 2018Updated 7 years ago
- Detecting position of sphere of specific radius in point cloud☆11Sep 19, 2018Updated 7 years ago