Lectures and materials for PLS 205: Experimental Design and Analysis at UC Davis
☆22Apr 7, 2023Updated 2 years ago
Alternatives and similar repositories for PLS205_course
Users that are interested in PLS205_course are comparing it to the libraries listed below
Sorting:
- This repo is mainly for beginners to intermediate level ML/Bioiniformatics engineers/students/enthusiasts. It mainly focus on creating a …☆15Dec 28, 2024Updated last year
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- Teaching modules for Human Genome Variation Lab.☆20Jun 6, 2025Updated 8 months ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Apr 14, 2019Updated 6 years ago
- 📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.☆23Apr 23, 2024Updated last year
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆27Feb 24, 2026Updated last week
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆31Jul 9, 2025Updated 7 months ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆29Dec 18, 2022Updated 3 years ago
- ☆12Dec 14, 2021Updated 4 years ago
- ☆10Nov 22, 2020Updated 5 years ago
- Scripts and files for the annual Short Read Analysis Workshop☆12Jul 21, 2025Updated 7 months ago
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆34Jan 13, 2026Updated last month
- GPUmatrix: An R package for algebra using GPU☆37Jan 16, 2025Updated last year
- Materials for Spring 2018 Applied Genomics Course☆79Jan 29, 2019Updated 7 years ago
- Introduction to Python3☆11Oct 26, 2020Updated 5 years ago
- 업무자동화를 위한 Python 강의를 듣고 정리한 자료☆13Oct 10, 2017Updated 8 years ago
- 10X single cell Nanopore reads simulation workflow. Complete documentation avialable at: https://GenomiqueENS.github.io/AsaruSim/☆13Jul 27, 2025Updated 7 months ago
- ☆10Dec 4, 2023Updated 2 years ago
- Companion repo for ExAC paper, 2015☆33Oct 10, 2016Updated 9 years ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆41Nov 18, 2025Updated 3 months ago
- IPHOMED☆11Jun 11, 2025Updated 8 months ago
- A set of protocols for remote connection, for two people to connect while apart.☆10Sep 20, 2022Updated 3 years ago
- 📝 Topic Modeling for Humans☆36Jan 7, 2021Updated 5 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- Efficient querying of biological databases☆42Oct 27, 2025Updated 4 months ago
- R as a backend for web apps.☆10Mar 7, 2018Updated 7 years ago
- ☆13Sep 22, 2017Updated 8 years ago
- An easy-to-use and interactive web application for FragPipe☆13Jul 28, 2025Updated 7 months ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Small R package with some functions to visualize DGE results downstream of DESeq2☆12Jul 6, 2023Updated 2 years ago
- An R package to write Datalog queries and interact with a Datomic database☆11Aug 12, 2021Updated 4 years ago
- This repo is archived, the these workflows are still available in the GATK repository under the scripts directory. The workflows are also…☆11Mar 9, 2020Updated 5 years ago
- ☆11Feb 24, 2026Updated last week
- ☆12Dec 23, 2025Updated 2 months ago
- ☆10May 17, 2017Updated 8 years ago
- ☆10Nov 24, 2019Updated 6 years ago
- R interface to 'Gos'☆39Feb 23, 2023Updated 3 years ago
- Single-cell analysis with non-negative matrix factorization☆48Jul 24, 2025Updated 7 months ago