Lectures and materials for PLS 205: Experimental Design and Analysis at UC Davis
☆22Apr 7, 2023Updated 2 years ago
Alternatives and similar repositories for PLS205_course
Users that are interested in PLS205_course are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repo is mainly for beginners to intermediate level ML/Bioiniformatics engineers/students/enthusiasts. It mainly focus on creating a …☆15Dec 28, 2024Updated last year
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- notes on the farm cluster☆16Feb 26, 2025Updated last year
- ☆15Dec 8, 2022Updated 3 years ago
- Repo for WEBSITE of R for Data Analysis & Visualization in Science, a quarter long course oriented for graduate students in Ecology at UC…☆29Sep 25, 2023Updated 2 years ago
- ☆19Sep 15, 2020Updated 5 years ago
- Teaching modules for Human Genome Variation Lab.☆21Jun 6, 2025Updated 9 months ago
- An R package to write Datalog queries and interact with a Datomic database☆11Aug 12, 2021Updated 4 years ago
- infinitylists allows you to generate place-based species lists for anywhere in the world, pulling collection data and iNaturalist records…☆13Apr 1, 2025Updated 11 months ago
- Introduction to Python3☆11Oct 26, 2020Updated 5 years ago
- This repository contains the latest version of the HomeRange data and R package.☆11Apr 17, 2025Updated 11 months ago
- Short course introducing R programming in the Tidyverse☆11Oct 22, 2024Updated last year
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆27Mar 17, 2026Updated last week
- 10X single cell Nanopore reads simulation workflow. Complete documentation avialable at: https://GenomiqueENS.github.io/AsaruSim/☆13Jul 27, 2025Updated 7 months ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago
- Assembly and Annotation of the Human Immune Health Atlas☆20Aug 28, 2025Updated 6 months ago
- ☆15Mar 28, 2025Updated 11 months ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago
- Materials for Spring 2018 Applied Genomics Course☆79Jan 29, 2019Updated 7 years ago
- ☆10Jul 1, 2020Updated 5 years ago
- Plot multiple sequence alignment (MSA)☆16Sep 23, 2024Updated last year
- Code base for "Evaluation of Machine Learning-Assisted Directed Evolution Across Diverse Combinatorial Landscapes"☆15Jun 19, 2025Updated 9 months ago
- Techniques, package recommendations and tricks for data visualization, mostly using ggplot2, and extension packages☆10Dec 23, 2021Updated 4 years ago
- ☆10Jan 29, 2020Updated 6 years ago
- Scripts for building computational models of gene regulation with tensorflow☆11Jan 21, 2020Updated 6 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Mar 17, 2025Updated last year
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Jul 24, 2024Updated last year
- Scripts and files for the annual Short Read Analysis Workshop☆12Mar 6, 2026Updated 2 weeks ago
- Resources for the Col-CEN reference genome assemblies☆11Feb 15, 2022Updated 4 years ago
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆11Jul 11, 2024Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Efficient retrieval, download, and unification of genomic data from leading biodiversity databases☆18Mar 16, 2026Updated last week
- A collection of modules to process and analyze IMGT-HLA sequences.☆29Dec 18, 2022Updated 3 years ago
- Pipeline for automatic processing and quality control of mass spectrometry data☆13Jan 30, 2025Updated last year
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Apr 14, 2019Updated 6 years ago
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆20Feb 20, 2025Updated last year
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 8 months ago
- ☆10May 17, 2017Updated 8 years ago