Adapted nnUNet framework with additional features to suit the requirements for pathology applications
☆25Mar 16, 2026Updated last month
Alternatives and similar repositories for nnUNet-for-pathology
Users that are interested in nnUNet-for-pathology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The source code for "Unsupervised Domain Adaptation for Pediatric Brain Tumor Segmentation", ADSMI @ MICCAI, 2024.☆15Jun 14, 2025Updated 10 months ago
- Variational Causal Bayesian Inference for Seismic Multi-hazard Estimation from Satellite Images☆14Feb 7, 2023Updated 3 years ago
- Awesome Domain Generalization for Computational Pathology☆24Nov 7, 2024Updated last year
- ☆13Aug 30, 2024Updated last year
- ☆71Sep 23, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Jan 9, 2025Updated last year
- Pathology image classifier architecture☆13Jan 20, 2020Updated 6 years ago
- Python implementation of the STAPLE segmentation algorithm☆34Jan 22, 2026Updated 2 months ago
- Python code to read/write .annotation files from Halo☆10Feb 19, 2025Updated last year
- ☆17Aug 8, 2022Updated 3 years ago
- ☆34Mar 30, 2026Updated 2 weeks ago
- Re-implementation of HIPT☆22Nov 25, 2025Updated 4 months ago
- [npj Digital Medicine] "Harnessing the power of longitudinal medical imaging for eye disease prognosis using Transformer-based sequence m…☆20Dec 18, 2024Updated last year
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆165Nov 19, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Open python perfusion tool for CTP and MRP ||| MRI DSC CT toolbox toolkit |||☆48Nov 20, 2025Updated 4 months ago
- Implementation of various label fusion approaches for medical imaging.☆14May 29, 2025Updated 10 months ago
- ☆17Jun 5, 2024Updated last year
- QuPath extension for Cellsparse☆19May 6, 2025Updated 11 months ago
- Diffusion-based Data Augmentation for Nuclei Image Segmentation (MICCAI 2023)☆23Oct 30, 2023Updated 2 years ago
- 【AAAI 2022】Temporal Action Proposal Generation with Background Constraint☆17May 13, 2022Updated 3 years ago
- H&E histopathological staining normalization☆112Jan 24, 2020Updated 6 years ago
- ☆43Jul 18, 2022Updated 3 years ago
- diffusion_video_paper_list☆29May 24, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆38Feb 6, 2026Updated 2 months ago
- Pytorch implementation for MICCAI2022 - Rethinking Surgical Instrument Segmentation: A Background Image Can Be All You Need☆16Aug 4, 2023Updated 2 years ago
- Self-Supervised Video Representation Learning with Motion-Aware Masked Autoencoders☆23Jul 22, 2024Updated last year
- [NeurIPS 2025] Few-Shot Learning from Gigapixel Images via Hierarchical Vision-Language Alignment and Modeling☆27Dec 16, 2025Updated 4 months ago
- 🏆1st place in the PANORAMA challenge (early detection of PDAC on contrast-enhanced CT)☆17Jan 13, 2026Updated 3 months ago
- Pytorch implementation of NASDM: Nuclei-Aware Semantic Histopathology Image Generation Using Diffusion Models☆20May 9, 2024Updated last year
- Code for the paper 'Spatio-temporal Learning from Longitudinal Data for Multiple Sclerosis Lesion Segmentation'☆17Jul 6, 2023Updated 2 years ago
- A Plex utility to tag new seasons as they air, perfect for visual organization.☆17Aug 7, 2025Updated 8 months ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆16Jan 5, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆47May 8, 2025Updated 11 months ago
- ☆16Apr 4, 2026Updated 2 weeks ago
- Multi-scale CNNs for histopathology image segmentation☆11Feb 28, 2021Updated 5 years ago
- Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…☆43Feb 11, 2022Updated 4 years ago
- research code collection☆14May 14, 2013Updated 12 years ago
- ☆11May 19, 2021Updated 4 years ago
- Official Code for "Large-scale Self-supervised Video Foundation Model for Intelligent Surgery"☆40Jun 4, 2025Updated 10 months ago