Evaluation code for the PanNuke dataset
☆29Oct 20, 2020Updated 5 years ago
Alternatives and similar repositories for PanNuke-metrics
Users that are interested in PanNuke-metrics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nuclei segmentation and classification (Cancer cells)☆25Jun 4, 2024Updated last year
- ☆47Oct 10, 2022Updated 3 years ago
- PointNu-Net Project☆18Dec 28, 2023Updated 2 years ago
- [ECCV 2024] Code for "Unleashing the Power of Prompt-driven Nucleus Instance Segmentation"☆58Jan 9, 2025Updated last year
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆67Dec 2, 2021Updated 4 years ago
- MICCAI-MLMI-2023: A Single-Point Prompt Network for Nuclei Image Segmentation (Boost SAM)☆30Oct 25, 2023Updated 2 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆696Oct 27, 2023Updated 2 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 3 years ago
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆367Jul 23, 2025Updated 8 months ago
- Benchmarking of deep learning and other segmentation methods for H&E images☆11Jul 6, 2023Updated 2 years ago
- Cell Graph Transformer for Nuclei Classification, AAAI 2024☆27Oct 8, 2024Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆73Nov 21, 2022Updated 3 years ago
- Train and fine-tune diffusion models. Perform image-to-image class transfer experiments.☆15Feb 13, 2025Updated last year
- CoNIC Challenge☆69Feb 19, 2024Updated 2 years ago
- This is the official repository for our CVPR 2023 paper 'Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supe…☆90Apr 16, 2024Updated last year
- H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net☆10Jul 30, 2024Updated last year
- ☆15Jul 16, 2024Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆56Apr 4, 2022Updated 3 years ago
- ☆21Nov 14, 2022Updated 3 years ago
- [NeurIPS 2025] Few-Shot Learning from Gigapixel Images via Hierarchical Vision-Language Alignment and Modeling☆26Dec 16, 2025Updated 3 months ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆21Jun 14, 2022Updated 3 years ago
- ☆30Mar 15, 2024Updated 2 years ago
- In the code, we presents attention module architecture searching for nuclei semantic segmentation and classification.☆35Jun 29, 2025Updated 8 months ago
- Deep learning-based multimodal integration of histology and genomics to improves cancer origin prediction☆28Mar 28, 2023Updated 2 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆45Feb 8, 2023Updated 3 years ago
- Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning☆11Mar 19, 2024Updated 2 years ago
- [arXiv '24] Efficient Cell Nuclei Instance Segmentation with Large Convolution Kernels☆47Aug 28, 2024Updated last year
- CEll spatial Organization-based graph convolutional network☆27Feb 3, 2024Updated 2 years ago
- SONNET: A self-guided ordinal regression neural network for segmentation and classification of nuclei in large-scale multi-tissue histolo…☆17Sep 15, 2021Updated 4 years ago
- ☆32Nov 1, 2022Updated 3 years ago
- ☆13May 31, 2023Updated 2 years ago
- [MedIA'25] UN-SAM: Domain-Adaptive Self-Prompt Segmentation for Universal Nuclei Images☆89Jun 25, 2025Updated 8 months ago
- ☆14Oct 29, 2020Updated 5 years ago
- Transformer-ConvNet with Masked AutoEncoder for Cardiac Image Registration☆10Aug 29, 2022Updated 3 years ago
- [NeurIPS'24] Free Lunch in Pathology Foundation Model: Task-specific Model Adaptation with Concept-Guided Feature Enhancement - NeurIPS 2…☆15Nov 19, 2024Updated last year
- Transformer Assisted Convolutional Neural Network for Cell Instance Segmentation [SegPC-2021]☆17Apr 13, 2021Updated 4 years ago
- ☆13Apr 28, 2024Updated last year
- A repository for Prototype Attention-based Multiple Instance Learning.☆14Jun 29, 2024Updated last year
- Nuclei Segmentation on CoNSeP dataset using UNet model based on pretrained ResNet18 from pytorch.☆13Apr 9, 2021Updated 4 years ago