scripts to monitor cryo-em jobs
☆10Sep 29, 2021Updated 4 years ago
Alternatives and similar repositories for cryoEM-Bash
Users that are interested in cryoEM-Bash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python customizations for the macromolecular model building software Coot.☆24Mar 25, 2026Updated 5 months ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- Python module to read/write SerialEM navigator files.☆12Jan 17, 2023Updated 3 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 7 months ago
- autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.☆19Jul 24, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scripts and Tools for Electron Microscopy Image Analysis.☆12Jul 27, 2026Updated last month
- 3D printing data in "Tidy up cryo-EM sample grids with 3D printed tools"☆14Apr 20, 2022Updated 4 years ago
- A Docker-based distribution of Appion-Protomo.☆11Oct 23, 2020Updated 5 years ago
- Cryo-EM data viewer in napari☆14Dec 1, 2020Updated 5 years ago
- Cryo-EM micrograph segmentation through deep learning☆23Oct 10, 2025Updated 10 months ago
- Python module for compressed MRCZ-file format☆14Aug 27, 2026Updated last week
- cryo_fit1 source codes, test files, live at .../phenix-xxxx/modules☆10Mar 25, 2022Updated 4 years ago
- ManifoldEM Python suite☆17Nov 22, 2024Updated last year
- Two-Dimensional Template Matching implemented in Python☆16Aug 27, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Localized reconstruction of flexible subunits from cryo-EM images☆16Oct 19, 2020Updated 5 years ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 5 years ago
- ☆12Apr 4, 2023Updated 3 years ago
- ☆11May 31, 2022Updated 4 years ago
- ☆16Jan 31, 2019Updated 7 years ago
- These are programs that deal with anisotropy (both resolution and sampling)☆23Mar 16, 2018Updated 8 years ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆21Jul 28, 2023Updated 3 years ago
- A CNN for denoising cryo-EM images☆14Dec 9, 2019Updated 6 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- Macromolecular viewer for crystallographers (WebGL)☆43Apr 5, 2026Updated 5 months ago
- Python scripts for easy RELION STAR file manipulation.☆28Mar 24, 2026Updated 5 months ago
- ☆11Aug 21, 2026Updated 2 weeks ago
- STAR file I/O in Python☆56Jun 22, 2026Updated 2 months ago
- Real-time object locator / evaluator for cryo-EM data collection☆12Dec 7, 2024Updated last year
- A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…☆14Sep 4, 2025Updated last year
- The Swiss Army Knife for Editing Relion .STAR Files☆21Jul 1, 2024Updated 2 years ago
- ☆19Dec 22, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Parallel cryo electron tomography via beam image shift☆42Aug 27, 2026Updated last week
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆18Mar 4, 2023Updated 3 years ago
- A laboratory information management system (LIMS) for cryoEM☆27Jan 12, 2023Updated 3 years ago
- Plugin to UCSF Chimera for segmenting Cryo-EM density maps☆12Dec 18, 2024Updated last year
- ☆134Jun 18, 2025Updated last year
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Mar 9, 2025Updated last year
- Tools for user-free preprocessing of cryo-EM datasets☆28Nov 22, 2022Updated 3 years ago