Alternatives and similar repositories for openslide-rs

Users that are interested in openslide-rs are comparing it to the libraries listed below

• amspath / libisyntax
  ☆22Updated 10 months ago
• amspath / slidescape
  ☆28Updated last month
• NKI-AI / fastslide
  C++ whole slide image reader with native python bindings
  ☆32Updated last week
• Booritas / slideio
  ☆73Updated 3 weeks ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆37Updated 3 weeks ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆104Updated 8 months ago
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆133Updated 5 months ago
• bioptimus / releases
  ☆109Updated last year
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆148Updated this week
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆52Updated 4 years ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year
• markowetzlab / slidl
  A Python library of pre- and post-processing tools for applying deep learning to whole-slide images
  ☆22Updated 3 years ago
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆37Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆90Updated 2 weeks ago
• bioimage-io / bioimageio-chatbot
  Your Personal Assistant in Computational Bioimaging.
  ☆45Updated 10 months ago
• histai / SPIDER
  SPIDER: A multi-organ pathology dataset with expert annotations and pre-trained models for AI-driven research. Available on Hugging Face …
  ☆41Updated 10 months ago
• owkin / histoplus
  ☆65Updated 5 months ago
• okunator / cellseg_gsontools
  Feature extraction from GEOJson nuclei and tissue segmentation maps
  ☆17Updated 7 months ago
• choosehappy / CohortFinder
  Intelligent data partitioning using quality control metrics
  ☆19Updated 8 months ago
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆47Updated last month
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆133Updated last week
• michaellee1 / CellSeg
  ☆24Updated 2 years ago
• DSLituiev / slideslicer
  a toolbox for manipulation of digital pathology slides and annotations
  ☆19Updated 5 years ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆64Updated 3 years ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆110Updated 3 months ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆79Updated 3 weeks ago
• PathologyDataScience / HistomicsML2
  A tool for training machine-learning models with whole-slide imaging datasets
  ☆26Updated 2 years ago
• imi-bigpicture / opentile
  Python library for reading tiles from wsi tiff-files.
  ☆16Updated 2 months ago
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆100Updated last year