Alternatives and similar repositories for openslide-rs

Users that are interested in openslide-rs are comparing it to the libraries listed below

• amspath / libisyntax
  ☆22Updated 9 months ago
• NKI-AI / fastslide
  C++ whole slide image reader with native python bindings
  ☆32Updated this week
• amspath / slidescape
  ☆28Updated last month
• Booritas / slideio
  ☆73Updated 2 weeks ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆37Updated last week
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆104Updated 8 months ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆78Updated 2 weeks ago
• HistAI / SPIDER
  SPIDER: A multi-organ pathology dataset with expert annotations and pre-trained models for AI-driven research. Available on Hugging Face …
  ☆41Updated 9 months ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆147Updated last week
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆109Updated 2 months ago
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆95Updated 2 months ago
• choosehappy / CohortFinder
  Intelligent data partitioning using quality control metrics
  ☆19Updated 7 months ago
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆36Updated last year
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆130Updated 5 months ago
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆100Updated last year
• jkefeli / tcga-path-reports
  TCGA Pathology Reports in Machine Readable Text
  ☆14Updated 2 years ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆38Updated 2 years ago
• bioptimus / releases
  ☆109Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆90Updated this week
• HistAI / hibou
  Hibou: Foundational Models for Pathology
  ☆76Updated last year
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆113Updated last year
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆203Updated 7 months ago
• owkin / plism-benchmark
  Official repository for PLISM robustness benchmark of pathology foundation models (MICCAI 2025)
  ☆18Updated 2 months ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆41Updated last month
• jopo666 / HistoEncoder
  ☆43Updated last year
• owkin / histoplus
  ☆62Updated 5 months ago
• owkin / HistoSSLscaling
  Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…
  ☆164Updated 2 years ago
• labsyspharm / orion-crc
  ☆27Updated 7 months ago