Alternatives and similar repositories for openslide-rs

Users that are interested in openslide-rs are comparing it to the libraries listed below

• NKI-AI / fastslide
  C++ whole slide image reader with native python bindings
  ☆32Updated 2 weeks ago
• amspath / libisyntax
  ☆21Updated 8 months ago
• amspath / slidescape
  ☆28Updated last week
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated last week
• Booritas / slideio
  ☆72Updated this week
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 6 months ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year
• zarrs / zarrs_tools
  Various tools for creating and manipulating Zarr V3 data with the zarrs Rust crate
  ☆30Updated last week
• HistAI / SPIDER
  SPIDER: A multi-organ pathology dataset with expert annotations and pre-trained models for AI-driven research. Available on Hugging Face …
  ☆37Updated 8 months ago
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆34Updated 11 months ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆97Updated last year
• owkin / histoplus
  ☆55Updated 3 months ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆89Updated this week
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆77Updated 2 weeks ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆38Updated last year
• HistAI / hibou
  Hibou: Foundational Models for Pathology
  ☆75Updated last year
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆128Updated 3 months ago
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆144Updated this week
• jkefeli / tcga-path-reports
  TCGA Pathology Reports in Machine Readable Text
  ☆14Updated last year
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 4 years ago
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆46Updated last week
• jopo666 / HistoEncoder
  ☆43Updated last year
• markowetzlab / slidl
  A Python library of pre- and post-processing tools for applying deep learning to whole-slide images
  ☆21Updated 2 years ago
• imi-bigpicture / opentile
  Python library for reading tiles from wsi tiff-files.
  ☆16Updated last week
• owkin / plism-benchmark
  Official repository for PLISM robustness benchmark of pathology foundation models (MICCAI 2025)
  ☆16Updated 3 weeks ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆41Updated this week
• choosehappy / CohortFinder
  Intelligent data partitioning using quality control metrics
  ☆19Updated 6 months ago
• labsyspharm / orion-crc
  ☆21Updated 5 months ago
• bioptimus / releases
  ☆109Updated last year