StevenVB12 / patternize
An R package for quantifying color pattern variation
β32Updated 9 months ago
Alternatives and similar repositories for patternize:
Users that are interested in patternize are comparing it to the libraries listed below
- πΆ An R package for genetic analysis of populations with mixed (clonal/sexual) reproductionβ69Updated 10 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids πππ₯π π₯β28Updated 3 weeks ago
- stackr: an R package to run stacks software pipelineβ29Updated 4 years ago
- initial commitβ26Updated 2 years ago
- Examples of application of comparative methods in Rβ58Updated 2 years ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.β147Updated last year
- the hierfstat packageβ24Updated 4 months ago
- Analysis of Phylogenetics and Evolutionβ64Updated last week
- method for modeling continuous and discrete population genetic structureβ35Updated last year
- See https://biometris.github.io/statgenGWAS for a full descriptionβ14Updated this week
- Importing and Analysing DArT type snp and silicodart dataβ34Updated this week
- deep learning prediction of geographic location from individual genome sequencesβ49Updated 2 months ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysisβ20Updated 4 months ago
- Detection of evolutionary shifts in Ornstein-Uhlenbeck modelsβ19Updated 2 years ago
- fastqcr: Quality Control of Sequencing Dataβ70Updated last year
- RADseq Data Exploration, Manipulation and Visualization using Rβ59Updated 4 months ago
- R package and web app for spatial visualisation of admixture on a projected mapβ43Updated last month
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.β25Updated 2 weeks ago
- Statistical methods for forest genetic resources analystsβ33Updated 7 months ago
- Shiny apps for teaching Population Geneticsβ62Updated 2 years ago
- Population and Evolutionary Genetics Analysis Systemβ29Updated 3 weeks ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/β103Updated 3 years ago
- Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categβ¦β25Updated 3 years ago
- A primer for computational tools to analyze genetics of populations in Rβ86Updated 4 years ago
- Species occurrence dot maps in Rβ21Updated 3 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4β40Updated 6 months ago
- package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/β12Updated last year
- Process MS results in R, in a tidy wayβ17Updated 6 years ago
- R package for sliding window analysisβ15Updated 6 years ago
- Pdfs of slides from 2018 popgen courseβ36Updated 6 years ago