Alternatives and similar repositories for biospacy:

Users that are interested in biospacy are comparing it to the libraries listed below

• lschmelzeisen / wikidated
  ☆15Updated 2 years ago
• allenai / genia-dependency-trees
  Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.
  ☆22Updated 4 years ago
• clinicalml / prancer
  Platform enabling Rapid Annotation for Clinical Entity Recognition
  ☆50Updated 2 years ago
• paulrinckens / timexy
  A spaCy custom component that extracts and normalizes temporal expressions
  ☆54Updated 2 years ago
• allenai / ForeCite
  ☆34Updated 2 years ago
• microsoft / spacy-ann-linker
  spaCy pipeline component for generating spaCy KnowledgeBase Alias Candidates for Entity Linking
  ☆85Updated 2 years ago
• kamalkraj / BioELECTRA
  BioELECTRA
  ☆51Updated 3 years ago
• malteos / scincl
  Neighborhood Contrastive Learning for Scientific Document Representations with Citation Embeddings (EMNLP 2022 paper)
  ☆67Updated 2 years ago
• lfurrer / bconv
  Python library for converting between BioNLP formats
  ☆21Updated last year
• SiphuLangeni / tortus
  A PyPI package for easy text annotation in a Jupyter Notebook.
  ☆28Updated 3 years ago
• ncbi-nlp / TeamTat
  Text annotation tool for team collaboration
  ☆39Updated last year
• allenai / ms2
  ☆66Updated 2 years ago
• salrowili / BioM-Transformers
  BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA
  ☆35Updated last year
• gyorilab / adeft
  Tool for disambiguating acronyms and abbreviations in text for NLP applications
  ☆22Updated 9 months ago
• flairNLP / CleanCoNLL
  The CleanCoNLL dataset from our EMNLP 2023 paper where we corrected annotation errors and inconsistencies in CoNLL-03.
  ☆23Updated 8 months ago
• pmbaumgartner / remerge-mwe
  REMERGE - Multi-Word Expression discovery algorithm
  ☆14Updated 2 years ago
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆24Updated 3 years ago
• allenai / multicite
  MultiCite code and data. Models are available on Huggingface.
  ☆31Updated 2 years ago
• jayded / evidence-inference
  Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…
  ☆62Updated 3 years ago
• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆43Updated last week
• bayer-science-for-a-better-life / data2text-bioleaflets
  Biomedical Data-to-Text Generation via Fine-Tuning Transformers
  ☆28Updated 3 years ago
• suamin / MedDistant19
  MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)
  ☆17Updated 2 years ago
• GateNLP / python-gatenlp
  Python text processing, pattern matching, and NLP framework
  ☆63Updated last year
• mit-ccc / TweebankNLP
  [LREC 2022] An off-the-shelf pre-trained Tweet NLP Toolkit (NER, tokenization, lemmatization, POS tagging, dependency parsing) + Tweeban…
  ☆104Updated last year
• stonkgs / stonkgs
  Multimodal Transformers for biomedical text and Knowledge Graph data
  ☆34Updated 2 years ago
• chanzuckerberg / ChemDisGene
  Bio relation extraction labeled dataset
  ☆44Updated 2 years ago
• YaserJaradeh / ThePlumber
  The Plumber framework for KG completion and structured triples extraction
  ☆21Updated last year
• allenai / BEEP
  Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system
  ☆26Updated last year
• AidaAmini / DyGIE-MECHANIC
  ☆13Updated 2 years ago
• explosion / spacy-huggingface-hub
  🤗 Push your spaCy pipelines to the Hugging Face Hub
  ☆43Updated 9 months ago