wjbmattingly / biospacyLinks
☆23Updated 2 years ago
Alternatives and similar repositories for biospacy
Users that are interested in biospacy are comparing it to the libraries listed below
Sorting:
- ☆34Updated 2 years ago
- ☆33Updated 5 months ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- A PyPI package for easy text annotation in a Jupyter Notebook.☆28Updated 3 years ago
- Biomedical Data-to-Text Generation via Fine-Tuning Transformers☆28Updated 3 years ago
- spaCy pipeline component for generating spaCy KnowledgeBase Alias Candidates for Entity Linking☆85Updated 2 years ago
- Bagpipes spaCy is a collection of custom spaCy pipeline components designed to enhance text processing capabilities.☆18Updated 10 months ago
- Text annotation tool for team collaboration☆41Updated last year
- SciWING is a modern toolkit for scientific document processing from WING-NUS☆63Updated 2 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- The CleanCoNLL dataset from our EMNLP 2023 paper where we corrected annotation errors and inconsistencies in CoNLL-03.☆24Updated 11 months ago
- Grounding of biomedical named entities with contextual disambiguation☆44Updated last month
- Python text processing, pattern matching, and NLP framework☆66Updated last year
- A spaCy custom component that extracts and normalizes temporal expressions☆54Updated 2 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- ☆55Updated last year
- ☆15Updated 3 years ago
- ☆34Updated last year
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- REMERGE - Multi-Word Expression discovery algorithm☆14Updated 2 years ago
- NXOntology data: making ontologies accessible as simple JSON files☆14Updated 3 weeks ago
- link raw affiliation to ROR ids☆30Updated last year
- Python library for converting between BioNLP formats☆21Updated 2 years ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆14Updated 3 years ago
- Neighborhood Contrastive Learning for Scientific Document Representations with Citation Embeddings (EMNLP 2022 paper)☆69Updated 2 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?☆15Updated 3 years ago
- A Serverless Text Annotation Tool for Corpus Development☆56Updated 4 months ago
- BioELECTRA☆50Updated 3 years ago
- MoodCat😼 classifies the mood of English sentences.☆14Updated 3 years ago