Alternatives and similar repositories for CORE-BEHRT

Users that are interested in CORE-BEHRT are comparing it to the libraries listed below

• eth-mds / ricu
  🏥 ICU data with R 🏥
  ☆48Updated 2 months ago
• ohdsi-studies / LegendT2dm
  ☆12Updated last week
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆87Updated 2 weeks ago
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆190Updated 2 weeks ago
• OHDSI / MIMIC
  MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…
  ☆86Updated last week
• spiros / chronological-map-phenotypes
  Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.
  ☆49Updated last year
• alistairewj / mimic-iv-aline-study
  Replication of the arterial line study in MIMIC-IV
  ☆75Updated 4 years ago
• alistairewj / mechanical-power
  Study on mechanical power in MIMIC-III and eICU-CRD
  ☆37Updated 6 years ago
• MI2DataLab / survshap
  SurvSHAP(t): Time-dependent explanations of machine learning survival models
  ☆94Updated last year
• ErikinBC / SurvSet
  ☆59Updated 5 months ago
• OHDSI / CohortMethod
  An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.
  ☆87Updated this week
• OHDSI / CohortDiagnostics
  An R package for performing various cohort diagnostics.
  ☆47Updated 2 months ago
• vanderschaarlab / autoprognosis
  A system for automating the design of predictive modeling pipelines tailored for clinical prognosis.
  ☆166Updated 7 months ago
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆110Updated 2 years ago
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆37Updated 3 months ago
• yikuan8 / MIMIC-IV-Postgres
  Installing MIMIC-IV in a local Postgres database
  ☆43Updated 4 years ago
• BrunakSanderLabs / CancerRiskNet
  ☆69Updated last year
• deepmedicine / Targeted-BEHRT
  Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records
  ☆20Updated 2 years ago
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆157Updated last week
• ksuresh17 / autoSurv
  ☆20Updated 3 years ago
• Novartis / torchsurv
  Deep survival analysis made easy
  ☆164Updated this week
• drizopoulos / JMbayes2
  Extended Joint Models for Longitudinal and Survival Data
  ☆94Updated last week
• justin13601 / ACES
  [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams
  ☆38Updated last month
• Medical-Event-Data-Standard / MEDS-DEV
  The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health
  ☆31Updated last week
• cumc-dbmi / cehrbert
  CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
  ☆42Updated last month
• OHDSI / PatientLevelPrediction
  An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.
  ☆210Updated this week
• theislab / ehrapy
  Electronic Health Record Analysis with Python.
  ☆315Updated this week
• philipdarke / ukbb-ehr-data
  Prepare UK Biobank Electronic Health Record data for research
  ☆30Updated 3 years ago
• MIT-LCP / vancomycin-nephrotoxicity
  Study in eICU-CRD about vancomycin and associated nephrotoxicity
  ☆10Updated 2 years ago
• danielegiardiello / Prediction_performance_survival
  Code repository for the manuscript: 'Assessing performance in prediction models with survival outcomes: practical guidance for Cox propor…
  ☆32Updated last month