A MATLAB toolbox for interacting with the Allen Brain Observatory
☆22Mar 9, 2026Updated 2 weeks ago
Alternatives and similar repositories for Brain-Observatory-Toolbox
Users that are interested in Brain-Observatory-Toolbox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is a tutorial for key data analysis steps used by neuroscientists - filtering, spike extraction, PCA, clustering, and spectral analy…☆28May 25, 2023Updated 2 years ago
- Neurophysiological data analyses by engineers, for physiologists.☆16May 27, 2025Updated 9 months ago
- Hennestad et al. 2022☆23Mar 17, 2026Updated last week
- NDI (Neuroscience Data Interface) is a cross-platform interface standard for reading neuroscience data and storing the results of analyse…☆15Updated this week
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12Updated this week
- A Matlab interface for reading and writing NWB files☆60Updated this week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆85Mar 11, 2026Updated last week
- ⚡ Generate channel maps for Neuropixels probes that respect electrode-ADC wiring constraints! ⚡☆30Updated this week
- Large field-of-view miniature microscope for rats and larger animals.☆18Jul 14, 2023Updated 2 years ago
- Machine Learning Methods for Neural Data Analysis☆20May 16, 2025Updated 10 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Feb 5, 2026Updated last month
- ActSort is an active learning accelerated cell sorter tool for calcium imaging.☆26Updated this week
- Climate Data Store Toolbox for MATLAB☆44Sep 29, 2025Updated 5 months ago
- Matlab code for interacting with the Open Ephys GUI☆18Sep 25, 2024Updated last year
- Best practices for creating high-quality and user-friendly MATLAB toolboxes, including recommendations for file organization, testing, an…☆115Dec 5, 2025Updated 3 months ago
- A neurorobot is a robot controlled by a computer simulation of a biological brain. At Backyard Brains we use neurorobots to teach neurosc…☆31Jan 23, 2026Updated 2 months ago
- Optical projection tomography microscope for isotropic whole-brain imaging☆16Jan 27, 2022Updated 4 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆27Dec 21, 2023Updated 2 years ago
- Match suite2p ROIs between imaging sessions☆28Apr 12, 2019Updated 6 years ago
- Better memory-mapped files in Matlab☆11May 18, 2020Updated 5 years ago
- Collaborative Brain Wave Analysis Pipeline (Cobrawap)☆26Sep 25, 2025Updated 5 months ago
- Resources for the IBL portion of the UCL Neuropixels Course 2024☆20Oct 16, 2024Updated last year
- Repository for content for the AMLD2020 workshop "Spiking neural networks for real-time inference tasks"☆17Oct 28, 2020Updated 5 years ago
- NIFTI tools for manipulating Nifty files with MATLAB.☆15Oct 6, 2017Updated 8 years ago
- Load TIFF files into matlab fast, with lazy loading☆37Dec 11, 2017Updated 8 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆59Jan 1, 2026Updated 2 months ago
- sync2brain's bossdevice RESEARCH Application Programmable Interface (API) for MATLAB☆14Mar 1, 2026Updated 3 weeks ago
- A self contained jupyter notebook demo showing how Tesseract OCR & Imagehashing can be used to recognize Magic Cards. This demo is meant …☆17Sep 14, 2022Updated 3 years ago
- A Matlab Toolbox that provides functions to interact with data repositories that implement the DataONE service API. The toolbox also incl…☆11Jun 6, 2017Updated 8 years ago
- Repository hosting the modern c++ course material☆11May 21, 2025Updated 10 months ago
- Automatic Analysis (aa)☆74Nov 8, 2024Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆159Feb 11, 2026Updated last month
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Oct 10, 2025Updated 5 months ago
- This repository contains the MATLAB code for the technical article "Developing MATLAB Apps Using the Model-View-Controller Pattern."☆15Jan 26, 2026Updated last month
- Apple Metal GPU processing toolbox for MATLAB on MacOS☆16Jul 3, 2024Updated last year
- matlab fuction for reading abf files including v2.0 files☆22May 30, 2025Updated 9 months ago
- Feedback-based Online Local Learning Of Weights (FOLLOW)☆12Feb 13, 2018Updated 8 years ago
- Matlab package implementing blind deconvolution method for neural spike recovery☆14Sep 20, 2016Updated 9 years ago
- Mixture of drifting t-distribution model for sorting spikes and measuring unit isolation☆11Jan 13, 2020Updated 6 years ago