Alternatives and similar repositories for nifti_tools

Users that are interested in nifti_tools are comparing it to the libraries listed below

• Washington-University / NHPPipelines
  Enhancements of HCP Pipelines for non-human primates
  ☆30Updated 3 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆55Updated last month
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated last year
• SIMEXP / niak
  GNU Octave library for connectivity analysis in large fMRI datasets
  ☆30Updated 3 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated last month
• asotiras / brainparts
  NMF Code for calculating components from Brain imaging data.
  ☆16Updated 3 years ago
• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆26Updated 5 months ago
• DevelopmentalImagingMCRI / freesurfer_statsurf_display
  Displays regional stats on Freesurfer surfaces in MATLAB
  ☆15Updated 5 years ago
• Jfortin1 / RAVEL
  Intensity normalization of structural MRIs using RAVEL
  ☆32Updated 2 years ago
• tanguyduval / imtool3D_td
  3D Image Viewer with ROI tools for Matlab ( NIFTI viewer, Manual segmentation )
  ☆47Updated last year
• niksirbi / brain4views
  Plotting 4 brain surface views on a single matplotlib figure
  ☆12Updated 4 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 months ago
• bids-apps / CPAC
  BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)
  ☆14Updated 2 months ago
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆75Updated 2 weeks ago
• daducci / COMMIT
  Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI
  ☆47Updated 2 months ago
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆32Updated 5 years ago
• benoitberanger / niix2bids
  Automatic BIDS architecture
  ☆15Updated last year
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆60Updated last year
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated last year
• raamana / graynet
  Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
  ☆39Updated last year
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆24Updated last month
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆60Updated last year
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆25Updated 2 years ago
• RIKEN-BCIL / NoddiSurfaceMapping
  Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)
  ☆13Updated 2 years ago
• bramzandbelt / slice_display
  Slice Display is a MATLAB toolbox for visualizing fMRI data. It can make dual-coded images (simultaneous display of contrast estimate and…
  ☆13Updated last year
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆37Updated 6 years ago
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆102Updated 3 months ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆28Updated 2 weeks ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆50Updated last year