int-brain-lab / neuropixels_course_2024
Resources for the IBL portion of the UCL Neuropixels Course 2024
☆10Updated 3 months ago
Alternatives and similar repositories for neuropixels_course_2024:
Users that are interested in neuropixels_course_2024 are comparing it to the libraries listed below
- IBL core shared libraries☆62Updated this week
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆49Updated this week
- ☆13Updated this week
- Python-based module with spike sorter wrappers and a simple API for running them.☆20Updated 3 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆37Updated 5 months ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆22Updated 2 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆85Updated this week
- pynapple collaborative data analysis (high level python scripts)☆37Updated 10 months ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆48Updated 2 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆47Updated 4 months ago
- Machine Learning Methods for Neural Data Analysis☆13Updated 5 months ago
- DataJoint pipeline for IBL project☆20Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆115Updated this week
- Archived code for reading data saved by the Open Ephys GUI☆59Updated last year
- ☆47Updated 2 years ago
- Information about Neuropixels electrode arrays☆85Updated last month
- Utilities for managing Neuropixel datasets and Kilosort results☆45Updated last year
- A Matlab interface for reading and writing NWB files☆50Updated last week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆96Updated this week
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆43Updated last year
- A modular package to control stimulation and track behaviour☆44Updated 2 months ago
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆43Updated 5 years ago
- Web app for viewing results of ephys spike sorting☆25Updated last week
- pyqt5 dependent applications for IBL sessions☆25Updated last week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆72Updated 4 months ago
- Tutorials for using SpikeInterface on extracellular datasets.☆61Updated last year
- Functions to assess quality of spike sorting results☆32Updated last year
- cortex lab code for electrophysiology☆77Updated 11 months ago