barbaLab / nigeLab

Related projects ⓘ

Alternatives and complementary repositories for nigeLab

• catniplab / crossFrequencyCoupling
  estimate cross-frequency coupling (aka nested oscillation or phase-amplitude coupling) for neural signals
  ☆15Updated 8 years ago
• int-brain-lab / iblrig
  Main repository for IBL rig code
  ☆22Updated this week
• AllenInstitute / MIES
  Multichannel Igor Electrophysiology Suite
  ☆23Updated this week
• NeuralEnsemble / neo-viewer
  Django/Angular/React software for graphing neural activity data (analog signals, spike trains etc.) read from Neo files.
  ☆11Updated 8 months ago
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆44Updated 2 weeks ago
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆34Updated 3 months ago
• flatironinstitute / spikeforest_old
  SpikeForest -- spike sorting analysis for website
  ☆16Updated 4 years ago
• flatironinstitute / ironclust
  Spike sorting software being developed at Flatiron Institute, based on JRCLUST (Janelia Rocket Cluster)
  ☆28Updated 2 years ago
• NBCLab / Onboarding
  Resources and activities for new NBC lab members. Inspired by the Whitaker lab's great Onboarding repo.
  ☆8Updated 6 months ago
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆48Updated this week
• siplab-gt / cleo
  Closed-Loop, Electrophysiology, and Optophysiology experiment simulation testbed for mesoscale neuroscience
  ☆15Updated last week
• zekebarger / AccuSleep
  Automatically score rodent sleep using EEG and EMG recordings
  ☆37Updated last year
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆83Updated this week
• sg-s / crabsort
  🦀🦀🦀 Sort spikes from extra-cellular recordings using neural networks. Fully automated.
  ☆19Updated 2 years ago
• SpikeInterface / MEArec
  Fast and customizable of extracellular recordings on MEA
  ☆42Updated last month
• int-brain-lab / paper-behavior
  The International Brain Laboratory et al. (2020) A standardized and reproducible method to measure decision-making in mice. bioRxiv, 9098…
  ☆12Updated 10 months ago
• HarveyLab / mouseVR
  Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks
  ☆40Updated 3 months ago
• flatironinstitute / mountainlab-js
  MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…
  ☆43Updated 5 years ago
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆119Updated last year
• cortex-lab / Rigbox
  A MATLAB toolbox for running behavioral neuroscience experiments and managing data
  ☆33Updated 5 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• lposani / decodanda
  Decoding and geometrical analysis of neural activity with built-in best practices
  ☆32Updated 2 weeks ago
• kwikteam / klustakwik2
  Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures
  ☆31Updated 5 years ago
• mullerlab / wave-matlab
  ☆12Updated 2 years ago
• scratcharchive / mountainsort_examples
  Examples of using MountainSort spike sorting software.
  ☆27Updated 5 years ago
• NeuralEnsemble / elephant
  Elephant is the Electrophysiology Analysis Toolkit
  ☆201Updated 2 weeks ago
• JARVIS-MoCap / JARVIS-AcquisitionTool
  AcquisitionTool to record multi-camera recordings for the JARVIS 3D Markerless Pose Estimation Toolbox
  ☆19Updated 11 months ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆109Updated 3 months ago
• int-brain-lab / IBL-pipeline
  DataJoint pipeline for IBL project
  ☆21Updated last year
• open-ephys / acquisition-board
  Hardware interface for streaming up to 512 channels of neural data via USB
  ☆52Updated 2 years ago