anand-subu / automated-clinical-coding-llmLinks
☆28Updated last year
Alternatives and similar repositories for automated-clinical-coding-llm
Users that are interested in automated-clinical-coding-llm are comparing it to the libraries listed below
Sorting:
- Winners of the SNOMED CT Entity Linking Challenge☆43Updated last year
- General tutorials for the setup and use of MedCAT.☆41Updated 7 months ago
- A simple python library for ICD-10-CM codes☆79Updated 4 months ago
- LLM Embeddings for ICD 10 Data☆61Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆30Updated last year
- Code and data for TrialGPT.☆137Updated 11 months ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Updated 4 years ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆48Updated last year
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆205Updated 6 months ago
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆15Updated 2 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆68Updated 6 months ago
- all scripts used in gatortron project☆130Updated 2 years ago
- Clinical text summarization by adapting large language models☆153Updated last year
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated 2 years ago
- Open source clinical text de-identification☆146Updated last year
- A collection of papers on automated medical coding from free-texts☆150Updated last year
- Med-BERT, contextualized embedding model for structured EHR data☆311Updated last year
- Work on using Retrieval-Augmented Generation (RAG) to combine Fast Healthcare Interoperable Resources (FHIR) with Generative AI.☆111Updated last year
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆98Updated last month
- Robust de-identification of medical notes using transformer architectures☆56Updated 3 years ago
- ETL Tool for converting datasets to OMOP CDM☆34Updated 3 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 7 months ago
- Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.☆110Updated 3 weeks ago
- An ETL pipeline to transform your EMP data to OMOP.☆14Updated 2 months ago
- ☆27Updated 6 months ago
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆76Updated 2 years ago
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆99Updated 7 months ago
- A modern, lightweight medication sig parser.☆12Updated 11 months ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆87Updated last month
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆48Updated last year